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Sample GSM234934 Query DataSets for GSM234934
Status Public on Oct 06, 2008
Title KNC_02
Sample type RNA
 
Source name skeletal muscle
Organism Bos taurus
Characteristics ~2 years old Hanwoo (Korean native cattle) longissimus dorsi
Extracted molecule polyA RNA
Extraction protocol total RNA: Trizol reagent
poly A RNA: Qiagen oligotex resin
Label biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description GeneChip Bovine Genome Array
Data processing global scaling
 
Submission date Oct 07, 2007
Last update date Aug 14, 2011
Contact name Cheol-Koo Lee
E-mail(s) cklee2005@korea.ac.kr
Phone 82-2-3290-3008
Organization name Korea University
Department Biotechnology
Lab Functional Genomics
Street address Korea University, Biotechnology #318 West building, Anam-dong, Seongbuk-gu
City Seoul
ZIP/Postal code 136-701
Country South Korea
 
Platform ID GPL2112
Series (1)
GSE9256 Transcriptomes from Longissimus dorsi samples of Korean Native Cattle (Hanwoo)

Data table header descriptions
ID_REF
VALUE Value
ABS_CALL Absolute call
DETECTION P-VALUE Detection p value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 479.554 P 0.000581214
AFFX-BioB-M_at 458.271 P 0.00010954
AFFX-BioB-3_at 336.681 P 0.000972149
AFFX-BioC-5_at 1530.31 P 5.16732e-05
AFFX-BioC-3_at 1318.76 P 4.42873e-05
AFFX-BioDn-5_at 2516.16 P 4.42873e-05
AFFX-BioDn-3_at 4402.15 P 9.4506e-05
AFFX-CreX-5_at 13370.2 P 5.16732e-05
AFFX-CreX-3_at 16128.7 P 4.42873e-05
AFFX-DapX-5_at 1355.83 P 5.16732e-05
AFFX-DapX-M_at 2780.57 P 9.4506e-05
AFFX-DapX-3_at 4442.58 P 4.42873e-05
AFFX-LysX-5_at 145.161 P 0.000146581
AFFX-LysX-M_at 300.787 P 0.000662269
AFFX-LysX-3_at 591.356 P 7.00668e-05
AFFX-PheX-5_at 175.288 P 9.4506e-05
AFFX-PheX-M_at 325.085 P 0.000509415
AFFX-PheX-3_at 508.605 P 0.000224668
AFFX-ThrX-5_at 505.129 P 6.02111e-05
AFFX-ThrX-M_at 638.319 P 4.42873e-05

Total number of rows: 24128

Table truncated, full table size 867 Kbytes.




Supplementary file Size Download File type/resource
GSM234934.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM234934.CHP.gz 5.9 Mb (ftp)(http) CHP
Processed data included within Sample table

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