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Sample GSM234935 Query DataSets for GSM234935
Status Public on Oct 06, 2008
Title KNC_03
Sample type RNA
 
Source name skeletal muscle
Organism Bos taurus
Characteristics ~2 years old Hanwoo (Korean native cattle) longissimus dorsi
Extracted molecule polyA RNA
Extraction protocol total RNA: Trizol reagent
poly A RNA: Qiagen oligotex resin
Label biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description GeneChip Bovine Genome Array
Data processing global scaling
 
Submission date Oct 07, 2007
Last update date Aug 14, 2011
Contact name Cheol-Koo Lee
E-mail(s) cklee2005@korea.ac.kr
Phone 82-2-3290-3008
Organization name Korea University
Department Biotechnology
Lab Functional Genomics
Street address Korea University, Biotechnology #318 West building, Anam-dong, Seongbuk-gu
City Seoul
ZIP/Postal code 136-701
Country South Korea
 
Platform ID GPL2112
Series (1)
GSE9256 Transcriptomes from Longissimus dorsi samples of Korean Native Cattle (Hanwoo)

Data table header descriptions
ID_REF
VALUE Value
ABS_CALL Absolute call
DETECTION P-VALUE Detection p value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1081.57 P 6.02111e-05
AFFX-BioB-M_at 1180.43 P 4.42873e-05
AFFX-BioB-3_at 945.921 P 4.42873e-05
AFFX-BioC-5_at 3271.7 P 4.42873e-05
AFFX-BioC-3_at 2762.05 P 4.42873e-05
AFFX-BioDn-5_at 5695.08 P 4.42873e-05
AFFX-BioDn-3_at 10138.3 P 6.02111e-05
AFFX-CreX-5_at 27819.2 P 4.42873e-05
AFFX-CreX-3_at 32551.4 P 4.42873e-05
AFFX-DapX-5_at 2675.27 P 4.42873e-05
AFFX-DapX-M_at 4275.44 P 7.00668e-05
AFFX-DapX-3_at 6484.29 P 4.42873e-05
AFFX-LysX-5_at 240.785 P 5.16732e-05
AFFX-LysX-M_at 510.399 P 0.000258358
AFFX-LysX-3_at 951.089 P 7.00668e-05
AFFX-PheX-5_at 286.739 P 0.000224668
AFFX-PheX-M_at 462.69 P 0.000389797
AFFX-PheX-3_at 799.091 P 5.16732e-05
AFFX-ThrX-5_at 840.767 P 4.42873e-05
AFFX-ThrX-M_at 1012.92 P 4.42873e-05

Total number of rows: 24128

Table truncated, full table size 867 Kbytes.




Supplementary file Size Download File type/resource
GSM234935.CEL.gz 3.1 Mb (ftp)(http) CEL
GSM234935.CHP.gz 5.7 Mb (ftp)(http) CHP
Processed data included within Sample table

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