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GEO accession:
Sample GSM234937
Query DataSets for GSM234937
Status
Public on Oct 06, 2008
Title
KNC_05
Sample type
RNA
Source name
skeletal muscle
Organism
Bos taurus
Characteristics
~2 years old Hanwoo (Korean native cattle) longissimus dorsi
Extracted molecule
polyA RNA
Extraction protocol
total RNA: Trizol reagent
poly A RNA: Qiagen oligotex resin
Label
biotin
Label protocol
Affymetrix protocol
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
GeneChip Bovine Genome Array
Data processing
global scaling
Submission date
Oct 07, 2007
Last update date
Aug 14, 2011
Contact name
Cheol-Koo Lee
E-mail(s)
cklee2005@korea.ac.kr
Phone
82-2-3290-3008
Organization name
Korea University
Department
Biotechnology
Lab
Functional Genomics
Street address
Korea University, Biotechnology #318 West building, Anam-dong, Seongbuk-gu
City
Seoul
ZIP/Postal code
136-701
Country
South Korea
Platform ID
GPL2112
Series (1)
GSE9256
Transcriptomes from Longissimus dorsi samples of Korean Native Cattle (Hanwoo)
Data table header descriptions
ID_REF
VALUE
Value
ABS_CALL
Absolute call
DETECTION P-VALUE
Detection p value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1327.24
P
8.14279e-05
AFFX-BioB-M_at
1700.18
P
4.42873e-05
AFFX-BioB-3_at
1193.11
P
9.4506e-05
AFFX-BioC-5_at
3665.08
P
4.42873e-05
AFFX-BioC-3_at
3869.19
P
4.42873e-05
AFFX-BioDn-5_at
7253.62
P
4.42873e-05
AFFX-BioDn-3_at
11894.6
P
4.42873e-05
AFFX-CreX-5_at
36033
P
5.16732e-05
AFFX-CreX-3_at
39366.3
P
4.42873e-05
AFFX-DapX-5_at
2011.69
P
5.16732e-05
AFFX-DapX-M_at
4342.84
P
5.16732e-05
AFFX-DapX-3_at
6911.63
P
4.42873e-05
AFFX-LysX-5_at
117.537
P
9.4506e-05
AFFX-LysX-M_at
467.798
P
0.000340305
AFFX-LysX-3_at
2679.43
P
4.42873e-05
AFFX-PheX-5_at
125.196
P
0.000126798
AFFX-PheX-M_at
414.607
P
0.000126798
AFFX-PheX-3_at
1203.42
P
4.42873e-05
AFFX-ThrX-5_at
254.957
P
0.000296708
AFFX-ThrX-M_at
402.575
P
4.42873e-05
Total number of rows:
24128
Table truncated, full table size
866 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM234937.CEL.gz
3.1 Mb
(ftp)
(http)
CEL
GSM234937.CHP.gz
5.7 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
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