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GEO accession:
Sample GSM237104
Query DataSets for GSM237104
Status
Public on Oct 17, 2007
Title
SKG_1
Sample type
RNA
Source name
FR4- CD4+ T lymphocyte stimulated with PMA and ionomycine
Organism
Mus musculus
Characteristics
Strain: SKG mice (BALB/c background)
Age: 40 weeks
Gender: Female
Tissue: LN
Extracted molecule
total RNA
Extraction protocol
QIAGEN RNeasy
Label
biotin
Label protocol
in vitro transcription; standard Affymetrix protocol
Hybridization protocol
16 hours; standard Affymetrix protocol
Scan protocol
GeneChip®Scanner
Description
-
Data processing
GeneSpring GX
Submission date
Oct 12, 2007
Last update date
Aug 28, 2018
Contact name
Shimon Sakaguchi
Organization name
Institute for Frontier Medical Sciences Kyoto University
Street address
53 Shogoin Kawahara-cho,
City
Kyoto
ZIP/Postal code
606-8507
Country
Japan
Platform ID
GPL1261
Series (1)
GSE9316
Gene Microarray analysis of Th17 cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
VALUE
ABS_CALL
ABS_CALL
DETECTION P-VALUE
Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
208.2
P
0.000147
AFFX-BioB-M_at
314.8
P
0.000044
AFFX-BioB-3_at
187.6
P
0.000044
AFFX-BioC-5_at
570.2
P
0.000052
AFFX-BioC-3_at
704.3
P
0.000044
AFFX-BioDn-5_at
1232.3
P
0.000044
AFFX-BioDn-3_at
1893.6
P
0.000044
AFFX-CreX-5_at
6643.3
P
0.000052
AFFX-CreX-3_at
7301.7
P
0.000044
AFFX-DapX-5_at
56.6
P
0.000297
AFFX-DapX-M_at
642.6
P
0.000081
AFFX-DapX-3_at
1174.6
P
0.000044
AFFX-LysX-5_at
18.9
P
0.006871
AFFX-LysX-M_at
98.2
P
0.00011
AFFX-LysX-3_at
260.3
P
0.000044
AFFX-PheX-5_at
27.5
P
0.001248
AFFX-PheX-M_at
113.4
P
0.000052
AFFX-PheX-3_at
158.3
P
0.000044
AFFX-ThrX-5_at
21.7
P
0.042948
AFFX-ThrX-M_at
78.1
P
0.000081
Total number of rows:
45101
Table truncated, full table size
1186 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM237104.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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