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GEO accession:
Sample GSM237105
Query DataSets for GSM237105
Status
Public on Oct 17, 2007
Title
SKG_2
Sample type
RNA
Source name
FR4- CD4+ T lymphocyte stimulated with PMA and ionomycine
Organism
Mus musculus
Characteristics
Strain: SKG mice (BALB/c background)
Age: 40 weeks
Gender: Female
Tissue: LN
Extracted molecule
total RNA
Extraction protocol
QIAGEN RNeasy
Label
biotin
Label protocol
in vitro transcription; standard Affymetrix protocol
Hybridization protocol
16 hours; standard Affymetrix protocol
Scan protocol
GeneChip®Scanner
Description
-
Data processing
GeneSpring GX
Submission date
Oct 12, 2007
Last update date
Aug 28, 2018
Contact name
Shimon Sakaguchi
Organization name
Institute for Frontier Medical Sciences Kyoto University
Street address
53 Shogoin Kawahara-cho,
City
Kyoto
ZIP/Postal code
606-8507
Country
Japan
Platform ID
GPL1261
Series (1)
GSE9316
Gene Microarray analysis of Th17 cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
VALUE
ABS_CALL
ABS_CALL
DETECTION P-VALUE
Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
205.6
P
0.000195
AFFX-BioB-M_at
283.1
P
0.000044
AFFX-BioB-3_at
177.3
P
0.000044
AFFX-BioC-5_at
498.2
P
0.000052
AFFX-BioC-3_at
638.2
P
0.000044
AFFX-BioDn-5_at
1154.7
P
0.000044
AFFX-BioDn-3_at
1760.5
P
0.000044
AFFX-CreX-5_at
6186.6
P
0.000052
AFFX-CreX-3_at
6884.8
P
0.000044
AFFX-DapX-5_at
59.5
P
0.00011
AFFX-DapX-M_at
715.5
P
0.000081
AFFX-DapX-3_at
1247.1
P
0.000044
AFFX-LysX-5_at
15.3
P
0.011384
AFFX-LysX-M_at
104.3
P
0.00011
AFFX-LysX-3_at
256.4
P
0.000044
AFFX-PheX-5_at
30.8
P
0.001796
AFFX-PheX-M_at
134
P
0.000052
AFFX-PheX-3_at
189.3
P
0.000044
AFFX-ThrX-5_at
30.6
P
0.021902
AFFX-ThrX-M_at
86.2
P
0.000052
Total number of rows:
45101
Table truncated, full table size
1188 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM237105.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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