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Sample GSM237296 Query DataSets for GSM237296
Status Public on Apr 12, 2008
Title MIA_2_MOE430_2
Sample type RNA
 
Source name MIA_SS: MIA, single transgenic
Organism Mus musculus
Characteristics E18.5 FVB/N mouse embryos, SP-C/MIA control
Extracted molecule total RNA
Extraction protocol GITC
Label biotin
Label protocol based on Affymetrix protocols
 
Hybridization protocol The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
Scan protocol Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
Description E18.5 FVB/N mouse embryos, SP-C/MIA control
Data processing raw data processed by Affymetrix Microarray Suite 5.0 is provided
 
Submission date Oct 12, 2007
Last update date Aug 14, 2011
Contact name Yan Xu
E-mail(s) yan.xu@cchmc.org
Phone 513-6368921
Organization name Cincinnati Children's Hospital Medical Center
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE9312 MIA overexpression

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Detection flag information
DETECTION P-VALUE Detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 941.135 P 0.000662269
AFFX-BioB-M_at 1668.48 P 6.02111e-05
AFFX-BioB-3_at 824.12 P 0.000581214
AFFX-BioC-5_at 2961.6 P 7.00668e-05
AFFX-BioC-3_at 3643.92 P 4.42873e-05
AFFX-BioDn-5_at 6906.7 P 4.42873e-05
AFFX-BioDn-3_at 11455.6 P 5.16732e-05
AFFX-CreX-5_at 37402.3 P 5.16732e-05
AFFX-CreX-3_at 46346.5 P 4.42873e-05
AFFX-DapX-5_at 9.54656 A 0.783476
AFFX-DapX-M_at 53.5297 A 0.327079
AFFX-DapX-3_at 35.6222 A 0.772364
AFFX-LysX-5_at 25.8163 A 0.313708
AFFX-LysX-M_at 10.7714 A 0.916408
AFFX-LysX-3_at 8.13495 A 0.724854
AFFX-PheX-5_at 18.0371 A 0.772364
AFFX-PheX-M_at 5.03576 A 0.910522
AFFX-PheX-3_at 203.217 A 0.239063
AFFX-ThrX-5_at 63.8583 A 0.39692
AFFX-ThrX-M_at 9.78333 A 0.760937

Total number of rows: 45101

Table truncated, full table size 1387 Kbytes.




Supplementary file Size Download File type/resource
GSM237296.CHP.gz 239.3 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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