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Sample GSM237300 Query DataSets for GSM237300
Status Public on Apr 12, 2008
Title MIA_5_MOE430_2
Sample type RNA
 
Source name MIA_DS: MIA, double transgenic
Organism Mus musculus
Characteristics E18.5 FVB/N mouse embryos, SP-C/MIA overexpressor
Extracted molecule total RNA
Extraction protocol GITC
Label biotin
Label protocol based on Affymetrix protocols
 
Hybridization protocol The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
Scan protocol Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
Description E18.5 FVB/N mouse embryos, SP-C/MIA overexpressor
Data processing raw data processed by Affymetrix Microarray Suite 5.0 is provided
 
Submission date Oct 12, 2007
Last update date Aug 14, 2011
Contact name Yan Xu
E-mail(s) yan.xu@cchmc.org
Phone 513-6368921
Organization name Cincinnati Children's Hospital Medical Center
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE9312 MIA overexpression

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Detection flag information
DETECTION P-VALUE Detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1157.61 P 0.000581214
AFFX-BioB-M_at 1702.62 P 7.00668e-05
AFFX-BioB-3_at 689.74 P 0.000340305
AFFX-BioC-5_at 3308.33 P 6.02111e-05
AFFX-BioC-3_at 3793.13 P 4.42873e-05
AFFX-BioDn-5_at 7005.91 P 4.42873e-05
AFFX-BioDn-3_at 12472.9 P 5.16732e-05
AFFX-CreX-5_at 39427.2 P 5.16732e-05
AFFX-CreX-3_at 46517.1 P 4.42873e-05
AFFX-DapX-5_at 7.27823 A 0.686277
AFFX-DapX-M_at 69.3022 A 0.41138
AFFX-DapX-3_at 79.1926 A 0.631562
AFFX-LysX-5_at 41.5149 A 0.60308
AFFX-LysX-M_at 72.8567 A 0.631562
AFFX-LysX-3_at 36.2214 A 0.340661
AFFX-PheX-5_at 12.6678 A 0.574038
AFFX-PheX-M_at 5.92407 A 0.986189
AFFX-PheX-3_at 103.741 A 0.60308
AFFX-ThrX-5_at 20.6792 A 0.804754
AFFX-ThrX-M_at 7.70936 A 0.814869

Total number of rows: 45101

Table truncated, full table size 1388 Kbytes.




Supplementary file Size Download File type/resource
GSM237300.CHP.gz 238.8 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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