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Sample GSM237618 Query DataSets for GSM237618
Status Public on Dec 15, 2007
Title striatum_het_1
Sample type RNA
 
Source name Ctip2 heterozygous mouse striatum, postnatal day 0
Organism Mus musculus
Characteristics Strain: BALB/c
Age: postnatal day 0
Genotype: Ctip2 heterozygote
Extracted molecule total RNA
Extraction protocol RNA was extracted using the StrataPrep Total RNA Mini Kit (Stratagene, La Jolla, CA), and RNA quality was assayed using a bioanalyzer (Agilent Technologies, Paola Alto, CA)
Label biotin
Label protocol Affymetrix small smple protocol
 
Hybridization protocol Per Affymetrix instructions for Mouse 430 2.0 arrays
Scan protocol Per Affymetrix instructions for Mouse 430 2.0 arrays
Description medium spiny neuron, striatum, brain, mutant mouse, Ctip2, Bcl11b, affymetrix
Data processing Microarray data were normalized using the RMA function within Bioconductor (Irizarry et al., 2003).
 
Submission date Oct 15, 2007
Last update date Aug 28, 2018
Contact name Bradley Molyneaux
E-mail(s) bmolyneaux@partners.org
Phone 617-726-3552
Organization name Harvard Medical School
Department MGH-HMS Center For Nervous System Repair
Lab Macklis Lab
Street address
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL1261
Series (1)
GSE9330 Expression data from wild type and Ctip2-/- (Bcl11b) mutant mouse striatum at P0
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA normalized intensity

Data table
ID_REF VALUE
1415670_at 8.932528669
1415671_at 10.92896711
1415672_at 11.11508255
1415673_at 8.597409665
1415674_a_at 10.93001553
1415675_at 9.340133138
1415676_a_at 11.95216246
1415677_at 8.648305806
1415678_at 10.92951109
1415679_at 10.58219101
1415680_at 8.312186992
1415681_at 9.641109806
1415682_at 7.885674673
1415683_at 10.35791425
1415684_at 7.403223658
1415685_at 7.601631932
1415686_at 9.811320516
1415687_a_at 10.64350116
1415688_at 11.01183494
1415689_s_at 7.673677306

Total number of rows: 45037

Table truncated, full table size 1024 Kbytes.




Supplementary file Size Download File type/resource
GSM237618.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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