NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM239667 Query DataSets for GSM239667
Status Public on Feb 15, 2009
Title Cortical vs Spinal Cord NS (15136)
Sample type RNA
 
Channel 1
Source name Cortical NS
Organism Mus musculus
Characteristics E14 secondary NS from cd1 mouse
Extracted molecule total RNA
Extraction protocol Trizol
Label cy3
Label protocol Agilent Low input amplification
 
Channel 2
Source name Spinal Cord NS
Organism Mus musculus
Characteristics E14 secondary NS from cd1 mouse
Extracted molecule total RNA
Extraction protocol Trizol
Label Cy5
Label protocol Agilent Low input amplification
 
 
Hybridization protocol as per agilent protocol
Scan protocol as per agilent protocol
Description as per agilent protocol
Data processing feature extraction from agilent
 
Submission date Oct 25, 2007
Last update date Aug 14, 2011
Contact name Terry Kelly
Organization name UCLA
Lab Kornblum
Street address 700 Westwood Blvd
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL2872
Series (1)
GSE9433 Secondary NS from Cortex and spinal cord

Data table header descriptions
ID_REF
VALUE Log ratio Cy5/Cy3
Ch1_SIG_MEAN Cortical NS
Ch2_SIG_MEAN Spinal Cord NS
Ch1_BKG_MEAN Cortical Background
Ch2BKG_MEAN Spinal Cord Background

Data table
ID_REF VALUE Ch1_SIG_MEAN Ch2_SIG_MEAN Ch1_BKG_MEAN Ch2BKG_MEAN
2 -7.51E-02 1.59E+02 1.99E+02 2.62E+01 4.29E+01
3 -3.49E-01 9.05E+01 6.12E+01 2.62E+01 4.31E+01
4 6.77E-02 3.04E+02 6.28E+02 2.63E+01 4.33E+01
5 -1.02E-01 8.58E+01 5.71E+01 2.66E+01 4.41E+01
7 1.62E-01 1.00E+02 1.15E+02 2.61E+01 4.30E+01
8 -2.00E-01 1.04E+02 8.13E+01 2.62E+01 4.33E+01
9 -5.82E-02 6.07E+02 1.06E+03 2.64E+01 4.44E+01
11 -2.11E-01 9.02E+01 5.70E+01 2.64E+01 4.34E+01
12 -2.13E-01 8.92E+01 5.81E+01 2.62E+01 4.38E+01
13 6.93E-01 7.83E+01 6.19E+01 2.61E+01 4.27E+01
14 -3.22E-01 1.04E+04 1.08E+04 2.61E+01 4.25E+01
15 -6.15E-02 3.09E+02 4.85E+02 2.66E+01 4.34E+01
16 -1.10E-01 1.14E+02 1.03E+02 2.66E+01 4.29E+01
17 -4.11E-01 1.03E+02 6.67E+01 2.65E+01 4.33E+01
18 -4.39E-02 1.28E+03 2.43E+03 2.68E+01 4.26E+01
19 -3.55E-02 3.80E+02 6.49E+02 2.68E+01 4.36E+01
20 -5.69E-01 1.01E+02 5.88E+01 2.68E+01 4.36E+01
21 -1.82E-01 9.36E+01 6.52E+01 2.65E+01 4.43E+01
22 -9.02E-02 1.07E+02 9.19E+01 2.64E+01 4.35E+01
23 -4.77E-01 1.08E+02 6.74E+01 2.67E+01 4.34E+01

Total number of rows: 41174

Table truncated, full table size 2057 Kbytes.




Supplementary file Size Download File type/resource
GSM239667.txt.gz 11.2 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap