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GEO accession:
Sample GSM241444
Query DataSets for GSM241444
Status
Public on Mar 28, 2008
Title
RatFemur_HypertrophicZone_42d
Sample type
RNA
Source name
42 day old rat femur
Organism
Rattus norvegicus
Characteristics
Age 42d
Male
Normal hypertropic zone laser-dissected from femur
Biomaterial provider
Damron
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy
Label
biotin
Label protocol
Nugen Ovation
Hybridization protocol
Affymetrix FS450_0004
Scan protocol
Affymetrix GeneChip 7G
Description
None
Data processing
Initial analysis - MAS5/GCOS
Final analysis - RMA
Submission date
Nov 06, 2007
Last update date
Aug 14, 2011
Contact name
Frank A Middleton
E-mail(s)
middletf@upstate.edu
Phone
315-464-7721
Organization name
SUNY Upstate Medical Univ
Department
Neuroscience and Physiology
Street address
505 Irving Avenue
City
Syracuse
State/province
NY
ZIP/Postal code
13210
Country
USA
Platform ID
GPL1355
Series (1)
GSE9537
Microarray analysis of perichondral and reserve growth plate zones
Data table header descriptions
ID_REF
VALUE
GCOS Expression value
ABS_CALL
GCOS Present/Absent Call
DETECTION P-VALUE
GCOS Detection P value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
31468
P
4.42873e-05
AFFX-BioB-M_at
55507.3
P
4.42873e-05
AFFX-BioB-3_at
45886.3
P
4.42873e-05
AFFX-BioC-5_at
89694.6
P
4.42873e-05
AFFX-BioC-3_at
68492.1
P
4.42873e-05
AFFX-BioDn-5_at
172178
P
4.42873e-05
AFFX-BioDn-3_at
239504
P
4.42873e-05
AFFX-CreX-5_at
455710
P
5.16732e-05
AFFX-CreX-3_at
496615
P
4.42873e-05
AFFX-DapX-5_at
98.8448
A
0.617401
AFFX-DapX-M_at
122.475
A
0.686292
AFFX-DapX-3_at
47.9958
A
0.5
AFFX-LysX-5_at
13.6159
A
0.760976
AFFX-LysX-M_at
62.6668
A
0.60308
AFFX-LysX-3_at
212.944
A
0.0726648
AFFX-PheX-5_at
14.6548
A
0.945787
AFFX-PheX-M_at
32.7977
A
0.963443
AFFX-PheX-3_at
158.689
A
0.368438
AFFX-ThrX-5_at
48.0903
A
0.783476
AFFX-ThrX-M_at
33.0799
A
0.897855
Total number of rows:
31099
Table truncated, full table size
923 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM241444.CEL.gz
1.9 Mb
(ftp)
(http)
CEL
GSM241444.CHP.gz
173.4 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
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