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Sample GSM241444 Query DataSets for GSM241444
Status Public on Mar 28, 2008
Title RatFemur_HypertrophicZone_42d
Sample type RNA
 
Source name 42 day old rat femur
Organism Rattus norvegicus
Characteristics Age 42d
Male
Normal hypertropic zone laser-dissected from femur
Biomaterial provider Damron
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy
Label biotin
Label protocol Nugen Ovation
 
Hybridization protocol Affymetrix FS450_0004
Scan protocol Affymetrix GeneChip 7G
Description None
Data processing Initial analysis - MAS5/GCOS
Final analysis - RMA
 
Submission date Nov 06, 2007
Last update date Aug 14, 2011
Contact name Frank A Middleton
E-mail(s) middletf@upstate.edu
Phone 315-464-7721
Organization name SUNY Upstate Medical Univ
Department Neuroscience and Physiology
Street address 750 East Adams St
City Syracuse
State/province NY
ZIP/Postal code 13210
Country USA
 
Platform ID GPL1355
Series (1)
GSE9537 Microarray analysis of perichondral and reserve growth plate zones

Data table header descriptions
ID_REF
VALUE GCOS Expression value
ABS_CALL GCOS Present/Absent Call
DETECTION P-VALUE GCOS Detection P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 31468 P 4.42873e-05
AFFX-BioB-M_at 55507.3 P 4.42873e-05
AFFX-BioB-3_at 45886.3 P 4.42873e-05
AFFX-BioC-5_at 89694.6 P 4.42873e-05
AFFX-BioC-3_at 68492.1 P 4.42873e-05
AFFX-BioDn-5_at 172178 P 4.42873e-05
AFFX-BioDn-3_at 239504 P 4.42873e-05
AFFX-CreX-5_at 455710 P 5.16732e-05
AFFX-CreX-3_at 496615 P 4.42873e-05
AFFX-DapX-5_at 98.8448 A 0.617401
AFFX-DapX-M_at 122.475 A 0.686292
AFFX-DapX-3_at 47.9958 A 0.5
AFFX-LysX-5_at 13.6159 A 0.760976
AFFX-LysX-M_at 62.6668 A 0.60308
AFFX-LysX-3_at 212.944 A 0.0726648
AFFX-PheX-5_at 14.6548 A 0.945787
AFFX-PheX-M_at 32.7977 A 0.963443
AFFX-PheX-3_at 158.689 A 0.368438
AFFX-ThrX-5_at 48.0903 A 0.783476
AFFX-ThrX-M_at 33.0799 A 0.897855

Total number of rows: 31099

Table truncated, full table size 923 Kbytes.




Supplementary file Size Download File type/resource
GSM241444.CEL.gz 1.9 Mb (ftp)(http) CEL
GSM241444.CHP.gz 173.4 Kb (ftp)(http) CHP
Processed data included within Sample table
Raw data provided as supplementary file

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