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GEO accession:
Sample GSM241445
Query DataSets for GSM241445
Status
Public on Mar 28, 2008
Title
RatFemur_HypertrophicZone_46d
Sample type
RNA
Source name
46 day old rat femur
Organism
Rattus norvegicus
Characteristics
Age 46d
Male
Normal hypertropic zone laser-dissected from femur
Biomaterial provider
Damron
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy
Label
biotin
Label protocol
Nugen Ovation
Hybridization protocol
Affymetrix FS450_0004
Scan protocol
Affymetrix GeneChip 7G
Description
None
Data processing
Initial analysis - MAS5/GCOS
Final analysis - RMA
Submission date
Nov 06, 2007
Last update date
Aug 14, 2011
Contact name
Frank A Middleton
E-mail(s)
middletf@upstate.edu
Phone
315-464-7721
Organization name
SUNY Upstate Medical Univ
Department
Neuroscience and Physiology
Street address
505 Irving Avenue
City
Syracuse
State/province
NY
ZIP/Postal code
13210
Country
USA
Platform ID
GPL1355
Series (1)
GSE9537
Microarray analysis of perichondral and reserve growth plate zones
Data table header descriptions
ID_REF
VALUE
GCOS Expression value
ABS_CALL
GCOS Present/Absent Call
DETECTION P-VALUE
GCOS Detection P value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
27742
P
4.42873e-05
AFFX-BioB-M_at
46707
P
4.42873e-05
AFFX-BioB-3_at
40177.3
P
4.42873e-05
AFFX-BioC-5_at
67164.9
P
4.42873e-05
AFFX-BioC-3_at
41566.6
P
4.42873e-05
AFFX-BioDn-5_at
136713
P
4.42873e-05
AFFX-BioDn-3_at
201834
P
4.42873e-05
AFFX-CreX-5_at
369837
P
5.16732e-05
AFFX-CreX-3_at
365285
P
4.42873e-05
AFFX-DapX-5_at
222.491
A
0.156732
AFFX-DapX-M_at
44.287
A
0.724854
AFFX-DapX-3_at
108.082
A
0.470241
AFFX-LysX-5_at
191.477
A
0.262791
AFFX-LysX-M_at
153.401
A
0.41138
AFFX-LysX-3_at
36.4178
A
0.672935
AFFX-PheX-5_at
29.7783
A
0.814869
AFFX-PheX-M_at
25.4292
A
0.922016
AFFX-PheX-3_at
27.3243
A
0.834139
AFFX-ThrX-5_at
31.5536
A
0.897835
AFFX-ThrX-M_at
40.7285
A
0.804734
Total number of rows:
31099
Table truncated, full table size
925 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM241445.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
GSM241445.CHP.gz
169.5 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
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