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Sample GSM241445 Query DataSets for GSM241445
Status Public on Mar 28, 2008
Title RatFemur_HypertrophicZone_46d
Sample type RNA
 
Source name 46 day old rat femur
Organism Rattus norvegicus
Characteristics Age 46d
Male
Normal hypertropic zone laser-dissected from femur
Biomaterial provider Damron
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy
Label biotin
Label protocol Nugen Ovation
 
Hybridization protocol Affymetrix FS450_0004
Scan protocol Affymetrix GeneChip 7G
Description None
Data processing Initial analysis - MAS5/GCOS
Final analysis - RMA
 
Submission date Nov 06, 2007
Last update date Aug 14, 2011
Contact name Frank A Middleton
E-mail(s) middletf@upstate.edu
Phone 315-464-7721
Organization name SUNY Upstate Medical Univ
Department Neuroscience and Physiology
Street address 750 East Adams St
City Syracuse
State/province NY
ZIP/Postal code 13210
Country USA
 
Platform ID GPL1355
Series (1)
GSE9537 Microarray analysis of perichondral and reserve growth plate zones

Data table header descriptions
ID_REF
VALUE GCOS Expression value
ABS_CALL GCOS Present/Absent Call
DETECTION P-VALUE GCOS Detection P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 27742 P 4.42873e-05
AFFX-BioB-M_at 46707 P 4.42873e-05
AFFX-BioB-3_at 40177.3 P 4.42873e-05
AFFX-BioC-5_at 67164.9 P 4.42873e-05
AFFX-BioC-3_at 41566.6 P 4.42873e-05
AFFX-BioDn-5_at 136713 P 4.42873e-05
AFFX-BioDn-3_at 201834 P 4.42873e-05
AFFX-CreX-5_at 369837 P 5.16732e-05
AFFX-CreX-3_at 365285 P 4.42873e-05
AFFX-DapX-5_at 222.491 A 0.156732
AFFX-DapX-M_at 44.287 A 0.724854
AFFX-DapX-3_at 108.082 A 0.470241
AFFX-LysX-5_at 191.477 A 0.262791
AFFX-LysX-M_at 153.401 A 0.41138
AFFX-LysX-3_at 36.4178 A 0.672935
AFFX-PheX-5_at 29.7783 A 0.814869
AFFX-PheX-M_at 25.4292 A 0.922016
AFFX-PheX-3_at 27.3243 A 0.834139
AFFX-ThrX-5_at 31.5536 A 0.897835
AFFX-ThrX-M_at 40.7285 A 0.804734

Total number of rows: 31099

Table truncated, full table size 925 Kbytes.




Supplementary file Size Download File type/resource
GSM241445.CEL.gz 2.1 Mb (ftp)(http) CEL
GSM241445.CHP.gz 169.5 Kb (ftp)(http) CHP
Processed data included within Sample table
Raw data provided as supplementary file

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