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Sample GSM241447 Query DataSets for GSM241447
Status Public on Mar 28, 2008
Title RatFemur_PerichondralZone_46d
Sample type RNA
 
Source name 46 day old rat femur
Organism Rattus norvegicus
Characteristics Age 46d
Male
Normal perichondral zone laser-dissected from femur
Biomaterial provider Damron
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy
Label biotin
Label protocol Nugen Ovation
 
Hybridization protocol Affymetrix FS450_0004
Scan protocol Affymetrix GeneChip 7G
Description None
Data processing Initial analysis - MAS5/GCOS
Final analysis - RMA
 
Submission date Nov 06, 2007
Last update date Aug 14, 2011
Contact name Frank A Middleton
E-mail(s) middletf@upstate.edu
Phone 315-464-7721
Organization name SUNY Upstate Medical Univ
Department Neuroscience and Physiology
Street address 750 East Adams St
City Syracuse
State/province NY
ZIP/Postal code 13210
Country USA
 
Platform ID GPL1355
Series (1)
GSE9537 Microarray analysis of perichondral and reserve growth plate zones

Data table header descriptions
ID_REF
VALUE GCOS Expression value
ABS_CALL GCOS Present/Absent Call
DETECTION P-VALUE GCOS Detection P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 29503.1 P 4.42873e-05
AFFX-BioB-M_at 54298.3 P 4.42873e-05
AFFX-BioB-3_at 43788.5 P 4.42873e-05
AFFX-BioC-5_at 79267.5 P 4.42873e-05
AFFX-BioC-3_at 48293.3 P 4.42873e-05
AFFX-BioDn-5_at 159850 P 4.42873e-05
AFFX-BioDn-3_at 244391 P 4.42873e-05
AFFX-CreX-5_at 496575 P 5.16732e-05
AFFX-CreX-3_at 495401 P 4.42873e-05
AFFX-DapX-5_at 410.156 A 0.108979
AFFX-DapX-M_at 137.689 A 0.5
AFFX-DapX-3_at 234.215 M 0.0584279
AFFX-LysX-5_at 80.8521 A 0.529762
AFFX-LysX-M_at 189.238 A 0.205732
AFFX-LysX-3_at 119.55 A 0.440641
AFFX-PheX-5_at 55.3055 A 0.891021
AFFX-PheX-M_at 17.6345 A 0.941556
AFFX-PheX-3_at 106.405 A 0.544587
AFFX-ThrX-5_at 84.1461 A 0.588627
AFFX-ThrX-M_at 87.7948 A 0.631562

Total number of rows: 31099

Table truncated, full table size 925 Kbytes.




Supplementary file Size Download File type/resource
GSM241447.CEL.gz 2.0 Mb (ftp)(http) CEL
GSM241447.CHP.gz 170.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Raw data provided as supplementary file

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