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Sample GSM241449 Query DataSets for GSM241449
Status Public on Mar 28, 2008
Title RatFemur_ProliferativeZone_46d
Sample type RNA
 
Source name 46 day old rat femur
Organism Rattus norvegicus
Characteristics Normal proliferative zone laser-dissected from femur
Biomaterial provider Damron
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy
Label biotin
Label protocol Nugen Ovation
 
Hybridization protocol Affymetrix FS450_0004
Scan protocol Affymetrix GeneChip 7G
Description None
Data processing Initial analysis - MAS5/GCOS
Final analysis - RMA
 
Submission date Nov 06, 2007
Last update date Aug 14, 2011
Contact name Frank A Middleton
E-mail(s) middletf@upstate.edu
Phone 315-464-7721
Organization name SUNY Upstate Medical Univ
Department Neuroscience and Physiology
Street address 750 East Adams St
City Syracuse
State/province NY
ZIP/Postal code 13210
Country USA
 
Platform ID GPL1355
Series (1)
GSE9537 Microarray analysis of perichondral and reserve growth plate zones

Data table header descriptions
ID_REF
VALUE GCOS Expression value
ABS_CALL GCOS Present/Absent Call
DETECTION P-VALUE GCOS Detection P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 40819.8 P 4.42873e-05
AFFX-BioB-M_at 75522.8 P 4.42873e-05
AFFX-BioB-3_at 64197.2 P 4.42873e-05
AFFX-BioC-5_at 112074 P 4.42873e-05
AFFX-BioC-3_at 67144.8 P 4.42873e-05
AFFX-BioDn-5_at 242378 P 4.42873e-05
AFFX-BioDn-3_at 321179 P 4.42873e-05
AFFX-CreX-5_at 543489 P 5.16732e-05
AFFX-CreX-3_at 569953 P 4.42873e-05
AFFX-DapX-5_at 105.252 A 0.455413
AFFX-DapX-M_at 59.191 A 0.760937
AFFX-DapX-3_at 22.8809 A 0.876448
AFFX-LysX-5_at 175.731 A 0.574044
AFFX-LysX-M_at 129.377 A 0.574038
AFFX-LysX-3_at 142.063 A 0.327079
AFFX-PheX-5_at 21.1819 A 0.984817
AFFX-PheX-M_at 185.621 A 0.645547
AFFX-PheX-3_at 19.0897 A 0.834139
AFFX-ThrX-5_at 19.0871 A 0.996405
AFFX-ThrX-M_at 21.7033 A 0.981719

Total number of rows: 31099

Table truncated, full table size 921 Kbytes.




Supplementary file Size Download File type/resource
GSM241449.CEL.gz 2.0 Mb (ftp)(http) CEL
GSM241449.CHP.gz 171.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Raw data provided as supplementary file

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