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GEO accession:
Sample GSM241549
Query DataSets for GSM241549
Status
Public on Mar 28, 2008
Title
RatFemur_ReserveZone_42d
Sample type
RNA
Source name
42 day old rat femur
Organism
Rattus norvegicus
Characteristics
Age 42d
Male
Normal reserve zone laser-dissected from femur
Biomaterial provider
Damron
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy
Label
biotin
Label protocol
Nugen Ovation
Hybridization protocol
Affymetrix FS450_0004
Scan protocol
Affymetrix GeneChip 7G
Description
None
Data processing
Initial analysis - MAS5/GCOS
Final analysis - RMA
Submission date
Nov 06, 2007
Last update date
Aug 14, 2011
Contact name
Frank A Middleton
E-mail(s)
middletf@upstate.edu
Phone
315-464-7721
Organization name
SUNY Upstate Medical Univ
Department
Neuroscience and Physiology
Street address
505 Irving Avenue
City
Syracuse
State/province
NY
ZIP/Postal code
13210
Country
USA
Platform ID
GPL1355
Series (1)
GSE9537
Microarray analysis of perichondral and reserve growth plate zones
Data table header descriptions
ID_REF
VALUE
GCOS Expression value
ABS_CALL
GCOS Present/Absent Call
DETECTION P-VALUE
GCOS Detection P value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
18903
P
4.42873e-05
AFFX-BioB-M_at
35833.7
P
4.42873e-05
AFFX-BioB-3_at
29202.8
P
4.42873e-05
AFFX-BioC-5_at
58500.2
P
4.42873e-05
AFFX-BioC-3_at
40613.5
P
4.42873e-05
AFFX-BioDn-5_at
106975
P
4.42873e-05
AFFX-BioDn-3_at
154745
P
4.42873e-05
AFFX-CreX-5_at
279136
P
4.42873e-05
AFFX-CreX-3_at
295899
P
4.42873e-05
AFFX-DapX-5_at
95.3022
A
0.382599
AFFX-DapX-M_at
9.5937
A
0.897835
AFFX-DapX-3_at
11.7923
A
0.772403
AFFX-LysX-5_at
9.99163
A
0.860518
AFFX-LysX-M_at
7.80539
A
0.876448
AFFX-LysX-3_at
26.9877
A
0.5
AFFX-PheX-5_at
104.523
A
0.440641
AFFX-PheX-M_at
10.3461
A
0.945787
AFFX-PheX-3_at
10.0477
A
0.973889
AFFX-ThrX-5_at
16.1395
A
0.71229
AFFX-ThrX-M_at
79.3003
A
0.559359
Total number of rows:
31099
Table truncated, full table size
932 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM241549.CEL.gz
2.0 Mb
(ftp)
(http)
CEL
GSM241549.CHP.gz
174.0 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
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