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Sample GSM241549 Query DataSets for GSM241549
Status Public on Mar 28, 2008
Title RatFemur_ReserveZone_42d
Sample type RNA
 
Source name 42 day old rat femur
Organism Rattus norvegicus
Characteristics Age 42d
Male
Normal reserve zone laser-dissected from femur
Biomaterial provider Damron
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy
Label biotin
Label protocol Nugen Ovation
 
Hybridization protocol Affymetrix FS450_0004
Scan protocol Affymetrix GeneChip 7G
Description None
Data processing Initial analysis - MAS5/GCOS
Final analysis - RMA
 
Submission date Nov 06, 2007
Last update date Aug 14, 2011
Contact name Frank A Middleton
E-mail(s) middletf@upstate.edu
Phone 315-464-7721
Organization name SUNY Upstate Medical Univ
Department Neuroscience and Physiology
Street address 750 East Adams St
City Syracuse
State/province NY
ZIP/Postal code 13210
Country USA
 
Platform ID GPL1355
Series (1)
GSE9537 Microarray analysis of perichondral and reserve growth plate zones

Data table header descriptions
ID_REF
VALUE GCOS Expression value
ABS_CALL GCOS Present/Absent Call
DETECTION P-VALUE GCOS Detection P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 18903 P 4.42873e-05
AFFX-BioB-M_at 35833.7 P 4.42873e-05
AFFX-BioB-3_at 29202.8 P 4.42873e-05
AFFX-BioC-5_at 58500.2 P 4.42873e-05
AFFX-BioC-3_at 40613.5 P 4.42873e-05
AFFX-BioDn-5_at 106975 P 4.42873e-05
AFFX-BioDn-3_at 154745 P 4.42873e-05
AFFX-CreX-5_at 279136 P 4.42873e-05
AFFX-CreX-3_at 295899 P 4.42873e-05
AFFX-DapX-5_at 95.3022 A 0.382599
AFFX-DapX-M_at 9.5937 A 0.897835
AFFX-DapX-3_at 11.7923 A 0.772403
AFFX-LysX-5_at 9.99163 A 0.860518
AFFX-LysX-M_at 7.80539 A 0.876448
AFFX-LysX-3_at 26.9877 A 0.5
AFFX-PheX-5_at 104.523 A 0.440641
AFFX-PheX-M_at 10.3461 A 0.945787
AFFX-PheX-3_at 10.0477 A 0.973889
AFFX-ThrX-5_at 16.1395 A 0.71229
AFFX-ThrX-M_at 79.3003 A 0.559359

Total number of rows: 31099

Table truncated, full table size 932 Kbytes.




Supplementary file Size Download File type/resource
GSM241549.CEL.gz 2.0 Mb (ftp)(http) CEL
GSM241549.CHP.gz 174.0 Kb (ftp)(http) CHP
Processed data included within Sample table
Raw data provided as supplementary file

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