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Sample GSM2433461 Query DataSets for GSM2433461
Status Public on May 23, 2017
Title EBC1-PR1
Sample type genomic
 
Source name Cell line with adquired resistance to MET tyrosine kinase inhibitors
Organism Homo sapiens
Characteristics tissue: EBC1 cells
cell type: lung cancer
phenotype: adquired resistance to MET tyrosine kinase inhibitors
Extracted molecule genomic DNA
Extraction protocol Total DNA was isolated by standard procedures
Label Cy3, Cy5
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Infinium MethylationEPIC Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
Data processing Genome Studio V2011.2
 
Submission date Dec 20, 2016
Last update date May 23, 2017
Contact name Sebastian Moran
Organization name IDIBELL
Department PEBC
Street address Av. Gran Via de l'Hospitalet, 199-203
City L'Hospitalet del Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
 
Platform ID GPL21145
Series (1)
GSE92608 Genomic and molecular screenings unveil different mechanisms for acquired resistance to MET inhibitors in lung cancer cells

Data table header descriptions
ID_REF
VALUE Average Beta
EBC1-PR1.Detection Pval Detection Pval
EBC1-PR1.Signal_A Signal A intensity
EBC1-PR1.Signal_B Signal B intensity

Data table
ID_REF VALUE EBC1-PR1.Detection Pval EBC1-PR1.Signal_A EBC1-PR1.Signal_B
cg00000029 0.6955103 0.00 648.1965 1709.018
cg00000103 0.5266057 0.00 1464.951 1740.858
cg00000109 0.8960348 0.00 163.7621 2273.26
cg00000155 0.8713861 0.00 618.0478 4864.925
cg00000158 0.8929818 0.00 641.3445 6185.933
cg00000165 0.7115392 0.00 1071.648 2890.076
cg00000221 0.6541277 0.00 1160.724 2384.332
cg00000236 0.8896781 0.00 256.2637 2873.045
cg00000289 0.8833836 0.00 141.8358 1831.937
cg00000292 0.8759735 0.00 678.3452 5497.291
cg00000321 0.7654019 0.00 337.8022 1428.377
cg00000363 0.8941763 0.00 416.5999 4365.104
cg00000540 0.5828106 0.00 2315.966 3375.088
cg00000579 0.9128099 0.00 440.5818 5659.455
cg00000596 0.08209655 0.00 4594.247 419.8497
cg00000622 0.01970348 0.00 9547.536 193.9108
cg00000658 0.7840293 0.00 1588.287 6128.917
cg00000714 0.8161708 0.00 1937.052 9044.169
cg00000721 0.8601295 0.00 390.5623 3016.698
cg00000734 0.07794172 0.00 8519.741 728.628

Total number of rows: 866895

Table truncated, full table size 37150 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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