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Sample GSM247678 Query DataSets for GSM247678
Status Public on Feb 01, 2008
Title Universal_ProtocolG_rep1
Sample type RNA
 
Source name Stratagene Universal Human Reference RNA (Catalog #740000)
Organism Homo sapiens
Characteristics Universal_ProtocolG_rep1
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol total RNA extracted
Label biotin
Label protocol 100ng of total RNA were amplified and labeled using the Whole Transcript (WT) Sense Target Labeling Protocol
 
Hybridization protocol Affymetrix GeneChip® Human Gene 1.0 ST arrays were hybridized to 11 mg of labeled, amplified cDNA, washed, stained and scanned according to the protocol described in WT Sense Target Labeling Assay Manual (Version 4; FS450_0007)
Scan protocol Scanning was done on an Affymetrix GeneChip Scanner 7G
Description Samples labeling and hybridization day 1, replicate 1
Data processing Normalized expression signals were calculated from Affymetrix CEL files using RMA (Irizarry et al., 2003).
 
Submission date Dec 07, 2007
Last update date Aug 14, 2011
Contact name Sylvain Pradervand
E-mail(s) Sylvain.Pradervand@unil.ch
Phone +41 21 692 39 08
Organization name UNI Lausanne
Department CIG
Lab DNA Array Facility
Street address Genopode
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL6244
Series (1)
GSE9819 Comparisons of Affymetrix Whole-Transcript Human Gene 1.0 ST array with standard 3' expression arrays

Data table header descriptions
ID_REF
VALUE Log2 normalized expression signal

Data table
ID_REF VALUE
7892501 6.429708
7892502 6.463722
7892503 3.990214
7892504 10.03728
7892505 2.84629
7892506 5.130235
7892507 4.790038
7892508 7.833644
7892509 11.74968
7892510 6.277458
7892511 3.902365
7892512 7.387273
7892513 3.934063
7892514 10.61858
7892515 9.556371
7892516 6.436338
7892517 6.260746
7892518 2.941279
7892519 5.874693
7892520 9.969357

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM247678.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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