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GEO accession:
Sample GSM249369
Query DataSets for GSM249369
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject with atherosclerosis, pair B.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
162.092
P
0.00843568
AFFX-BioB-M_at
227.689
P
0.000258358
AFFX-BioB-3_at
135.022
P
0.00141043
AFFX-BioC-5_at
596.88
P
9.4506e-05
AFFX-BioC-3_at
286.841
P
8.14279e-05
AFFX-BioDn-5_at
287.903
P
0.000445901
AFFX-BioDn-3_at
2793.49
P
7.00668e-05
AFFX-CreX-5_at
3526.69
P
4.42873e-05
AFFX-CreX-3_at
6126.24
P
4.42873e-05
AFFX-DapX-5_at
14.7333
A
0.175328
AFFX-DapX-M_at
6.0112
A
0.712274
AFFX-DapX-3_at
1.37733
A
0.981719
AFFX-LysX-5_at
1.33044
A
0.941556
AFFX-LysX-M_at
20.297
A
0.631562
AFFX-LysX-3_at
13.3237
A
0.425962
AFFX-PheX-5_at
1.90537
A
0.941556
AFFX-PheX-M_at
2.83802
A
0.941556
AFFX-PheX-3_at
23.0405
A
0.440646
AFFX-ThrX-5_at
4.13
A
0.712257
AFFX-ThrX-M_at
18.2541
A
0.327079
Total number of rows:
22283
Table truncated, full table size
661 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249369.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM249369.CHP.gz
5.6 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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