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GEO accession:
Sample GSM249383
Query DataSets for GSM249383
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject with atherosclerosis, pair E.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
88.5643
P
0.0032123
AFFX-BioB-M_at
214.592
P
0.000340305
AFFX-BioB-3_at
106.118
P
0.000509415
AFFX-BioC-5_at
390.605
P
9.4506e-05
AFFX-BioC-3_at
262.658
P
7.00668e-05
AFFX-BioDn-5_at
204.309
P
0.00010954
AFFX-BioDn-3_at
1880.28
P
8.14279e-05
AFFX-CreX-5_at
2851.94
P
4.42873e-05
AFFX-CreX-3_at
4605.66
P
4.42873e-05
AFFX-DapX-5_at
9.59119
M
0.050229
AFFX-DapX-M_at
21.3102
A
0.0780018
AFFX-DapX-3_at
1.54196
A
0.814869
AFFX-LysX-5_at
6.35011
A
0.425962
AFFX-LysX-M_at
5.04827
A
0.603089
AFFX-LysX-3_at
3.69952
A
0.5
AFFX-PheX-5_at
3.20057
A
0.51489
AFFX-PheX-M_at
3.0401
A
0.783476
AFFX-PheX-3_at
12.0027
A
0.382599
AFFX-ThrX-5_at
7.45633
A
0.58862
AFFX-ThrX-M_at
12.2408
A
0.227636
Total number of rows:
22283
Table truncated, full table size
666 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249383.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM249383.CHP.gz
5.9 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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