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GEO accession:
Sample GSM249384
Query DataSets for GSM249384
Status
Public on Dec 14, 2007
Title
Foam cells from subject with atherosclerosis, pair E.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
109.394
P
0.000856509
AFFX-BioB-M_at
341.209
P
9.4506e-05
AFFX-BioB-3_at
108.252
P
0.000146581
AFFX-BioC-5_at
387.636
P
8.14279e-05
AFFX-BioC-3_at
242.135
P
5.16732e-05
AFFX-BioDn-5_at
198.842
P
7.00668e-05
AFFX-BioDn-3_at
2339.55
P
9.4506e-05
AFFX-CreX-5_at
3116.7
P
4.42873e-05
AFFX-CreX-3_at
5641.84
P
4.42873e-05
AFFX-DapX-5_at
11.9009
M
0.0584438
AFFX-DapX-M_at
9.67139
A
0.313723
AFFX-DapX-3_at
0.783233
A
0.957038
AFFX-LysX-5_at
5.60316
A
0.425962
AFFX-LysX-M_at
3.37391
A
0.58862
AFFX-LysX-3_at
7.01285
A
0.287743
AFFX-PheX-5_at
9.26141
A
0.368438
AFFX-PheX-M_at
1.89566
A
0.868639
AFFX-PheX-3_at
16.6935
A
0.41138
AFFX-ThrX-5_at
2.09237
A
0.843268
AFFX-ThrX-M_at
8.59144
A
0.340661
Total number of rows:
22283
Table truncated, full table size
666 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249384.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM249384.CHP.gz
5.8 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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