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GEO accession:
Sample GSM249387
Query DataSets for GSM249387
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject with atherosclerosis, pair F.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
86.95
P
0.0396608
AFFX-BioB-M_at
132.612
P
0.000972149
AFFX-BioB-3_at
68.7572
P
0.00762003
AFFX-BioC-5_at
249.981
P
0.000296708
AFFX-BioC-3_at
146.142
P
0.000224668
AFFX-BioDn-5_at
107.333
P
0.00179591
AFFX-BioDn-3_at
1104.36
P
0.00010954
AFFX-CreX-5_at
1513.13
P
4.42873e-05
AFFX-CreX-3_at
3041.92
P
4.42873e-05
AFFX-DapX-5_at
10.7027
A
0.131361
AFFX-DapX-M_at
12.5308
A
0.425962
AFFX-DapX-3_at
3.09188
A
0.843268
AFFX-LysX-5_at
1.32238
A
0.941556
AFFX-LysX-M_at
9.43209
A
0.48511
AFFX-LysX-3_at
3.54822
A
0.470241
AFFX-PheX-5_at
1.87336
A
0.672921
AFFX-PheX-M_at
2.3669
A
0.960339
AFFX-PheX-3_at
18.1901
A
0.440646
AFFX-ThrX-5_at
3.97494
A
0.783476
AFFX-ThrX-M_at
9.73622
A
0.250796
Total number of rows:
22283
Table truncated, full table size
665 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249387.CEL.gz
2.3 Mb
(ftp)
(http)
CEL
GSM249387.CHP.gz
6.0 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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