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GEO accession:
Sample GSM249404
Query DataSets for GSM249404
Status
Public on Dec 14, 2007
Title
Foam cells from subject without atherosclerosis, pair K.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject without atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
87.108
M
0.0464816
AFFX-BioB-M_at
102.359
P
0.00844047
AFFX-BioB-3_at
51.8908
P
0.0336773
AFFX-BioC-5_at
235.819
P
0.000258358
AFFX-BioC-3_at
119.8
P
0.000296708
AFFX-BioDn-5_at
105.404
M
0.0464816
AFFX-BioDn-3_at
1229.39
P
0.00110197
AFFX-CreX-5_at
1485.51
P
4.42873e-05
AFFX-CreX-3_at
2483.45
P
4.42873e-05
AFFX-DapX-5_at
23.2431
P
0.036569
AFFX-DapX-M_at
16.8385
A
0.327079
AFFX-DapX-3_at
4.84614
A
0.897835
AFFX-LysX-5_at
3.17202
A
0.772364
AFFX-LysX-M_at
22.1134
A
0.382599
AFFX-LysX-3_at
2.92924
A
0.724854
AFFX-PheX-5_at
10.5399
A
0.470241
AFFX-PheX-M_at
4.40469
A
0.834139
AFFX-PheX-3_at
6.44173
A
0.860518
AFFX-ThrX-5_at
5.88098
A
0.868639
AFFX-ThrX-M_at
19.4067
A
0.354453
Total number of rows:
22283
Table truncated, full table size
661 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249404.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
GSM249404.CHP.gz
6.0 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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