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GEO accession:
Sample GSM249409
Query DataSets for GSM249409
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject without atherosclerosis, pair M.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject without atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
131.796
P
0.00255552
AFFX-BioB-M_at
241.234
P
0.000258358
AFFX-BioB-3_at
148.405
P
0.000169227
AFFX-BioC-5_at
410.698
P
6.02111e-05
AFFX-BioC-3_at
231.902
P
6.02111e-05
AFFX-BioDn-5_at
211.831
P
8.14279e-05
AFFX-BioDn-3_at
1916.08
P
7.00668e-05
AFFX-CreX-5_at
2353.24
P
4.42873e-05
AFFX-CreX-3_at
4313.44
P
4.42873e-05
AFFX-DapX-5_at
9.13726
A
0.205732
AFFX-DapX-M_at
19.2874
A
0.300606
AFFX-DapX-3_at
1.00155
A
0.949771
AFFX-LysX-5_at
6.39023
A
0.51489
AFFX-LysX-M_at
8.29523
A
0.5
AFFX-LysX-3_at
3.07934
A
0.455413
AFFX-PheX-5_at
0.682695
A
0.987453
AFFX-PheX-M_at
0.882843
A
0.953518
AFFX-PheX-3_at
6.56419
A
0.48511
AFFX-ThrX-5_at
3.28394
A
0.60308
AFFX-ThrX-M_at
8.2183
A
0.368438
Total number of rows:
22283
Table truncated, full table size
667 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249409.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM249409.CHP.gz
5.7 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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