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GEO accession:
Sample GSM249411
Query DataSets for GSM249411
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject with atherosclerosis, pair M.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
59.5787
A
0.0629293
AFFX-BioB-M_at
102.068
P
0.00110197
AFFX-BioB-3_at
60.565
P
0.00618711
AFFX-BioC-5_at
196.697
P
0.000389797
AFFX-BioC-3_at
127.298
P
0.000389797
AFFX-BioDn-5_at
122.352
P
0.00227496
AFFX-BioDn-3_at
1101.7
P
0.000195116
AFFX-CreX-5_at
1427.85
P
4.42873e-05
AFFX-CreX-3_at
3228.11
P
4.42873e-05
AFFX-DapX-5_at
10.5149
A
0.275146
AFFX-DapX-M_at
14.7573
A
0.262827
AFFX-DapX-3_at
1.80673
A
0.981719
AFFX-LysX-5_at
0.977639
A
0.921998
AFFX-LysX-M_at
4.38416
A
0.60308
AFFX-LysX-3_at
3.00656
A
0.51489
AFFX-PheX-5_at
1.19502
A
0.957038
AFFX-PheX-M_at
1.59575
A
0.945787
AFFX-PheX-3_at
15.2005
A
0.368438
AFFX-ThrX-5_at
3.26333
A
0.843268
AFFX-ThrX-M_at
7.3367
A
0.41138
Total number of rows:
22283
Table truncated, full table size
666 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249411.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
GSM249411.CHP.gz
6.0 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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