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GEO accession:
Sample GSM249414
Query DataSets for GSM249414
Status
Public on Dec 14, 2007
Title
Foam cells from subject with atherosclerosis, pair N.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
63.272
P
0.00401721
AFFX-BioB-M_at
102.344
P
0.0012475
AFFX-BioB-3_at
74.5878
P
0.00141043
AFFX-BioC-5_at
209.835
P
0.000146581
AFFX-BioC-3_at
133.82
P
0.000169227
AFFX-BioDn-5_at
122.107
P
0.000296708
AFFX-BioDn-3_at
1019.97
P
0.00010954
AFFX-CreX-5_at
1614.11
P
4.42873e-05
AFFX-CreX-3_at
3181.41
P
4.42873e-05
AFFX-DapX-5_at
7.12962
A
0.41138
AFFX-DapX-M_at
6.08871
A
0.58862
AFFX-DapX-3_at
3.39492
A
0.749204
AFFX-LysX-5_at
1.27346
A
0.969024
AFFX-LysX-M_at
5.2325
A
0.617401
AFFX-LysX-3_at
6.47444
A
0.440646
AFFX-PheX-5_at
5.02247
A
0.544587
AFFX-PheX-M_at
2.37069
A
0.824672
AFFX-PheX-3_at
15.7115
A
0.287743
AFFX-ThrX-5_at
3.5359
A
0.978098
AFFX-ThrX-M_at
2.58289
A
0.645547
Total number of rows:
22283
Table truncated, full table size
668 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249414.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM249414.CHP.gz
6.0 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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