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GEO accession:
Sample GSM249422
Query DataSets for GSM249422
Status
Public on Dec 14, 2007
Title
Foam cells from subject with atherosclerosis, pair P.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
58.7447
A
0.083592
AFFX-BioB-M_at
97.1159
P
0.00255552
AFFX-BioB-3_at
93.5718
P
0.00618711
AFFX-BioC-5_at
248.267
P
0.000340305
AFFX-BioC-3_at
143.381
P
0.000340305
AFFX-BioDn-5_at
184.761
P
0.00227496
AFFX-BioDn-3_at
1027.8
P
0.00010954
AFFX-CreX-5_at
1513.93
P
4.42873e-05
AFFX-CreX-3_at
3096.09
P
4.42873e-05
AFFX-DapX-5_at
2.98643
A
0.834139
AFFX-DapX-M_at
13.2423
A
0.645547
AFFX-DapX-3_at
12.3238
A
0.645547
AFFX-LysX-5_at
3.43286
A
0.737173
AFFX-LysX-M_at
9.60238
A
0.783476
AFFX-LysX-3_at
5.10912
A
0.724854
AFFX-PheX-5_at
3.84985
A
0.804734
AFFX-PheX-M_at
14.5207
A
0.559354
AFFX-PheX-3_at
28.2424
A
0.327079
AFFX-ThrX-5_at
13.2192
A
0.749204
AFFX-ThrX-M_at
14.7361
A
0.48511
Total number of rows:
22283
Table truncated, full table size
663 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249422.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM249422.CHP.gz
5.9 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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