GEO help: Mouse over screen elements for information.
Status
Public on Jan 18, 2009
Title
12Months_3
Sample type
RNA
Source name
rat hippocampal CA1, 12 month old
Organism
Rattus norvegicus Characteristics
Rat hippocampus CA1
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix
Label
Standard Affymetrix
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affimetrix
Scan protocol
Affy
Description
rat hippocampal CA1, 12 month old, replicate 3
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Dec 20, 2007
Last update date
Dec 08, 2008
Contact name
Eric M Blalock
E-mail(s)
eric.blalock@uky.edu Phone
859-323-8033
Organization name
University of Kentucky
Department
Molecular and Biomedical Pharmacology
Lab
Blalock
Street address
800 Rose St.
City
Lexington
State/province
KY
ZIP/Postal code
40475
Country
USA
Platform ID
GPL341 Series (1)
GSE9990 Transcriptional profiles of rodent hippocampal CA1 tissue during aging and cognitive decline
Data table header descriptions ID_REF Probe Set
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table ID_REF VALUE ABS_CALL 1367452_at
3778.1
P
1367453_at
1954
P
1367454_at
1240.3
P
1367455_at
2861.5
P
1367456_at
2485.1
P
1367457_at
1463.9
P
1367458_at
660.9
P
1367459_at
9895.6
P
1367460_at
3430.8
P
1367461_at
786.2
P
1367462_at
2806.5
P
1367463_at
1322.5
P
1367464_at
1128.7
P
1367465_at
1606.8
P
1367466_at
1802.3
P
1367467_at
2500.5
P
1367468_at
752
P
1367469_at
2710.9
P
1367470_at
2305.3
P
1367471_at
703.5
P
15923 291 Kbytes .Supplementary file Size Download File type/resource GSM252539.CEL.gz
2.4 Mb
(ftp) (http) CEL
Processed data included within Sample table
