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Status
Public on Jan 18, 2009
Title
12Months_9
Sample type
RNA
Source name
rat hippocampal CA1, 12 month old
Organism
Rattus norvegicus
Characteristics
Rat hippocampus CA1 Fisher 344 Rat Male
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix
Label
Standard Affymetrix
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affimetrix
Scan protocol
Affy
Description
rat hippocampal CA1, 12 month old, replicate 9
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Dec 20, 2007
Last update date
Dec 08, 2008
Contact name
Eric M Blalock
E-mail(s)
eric.blalock@uky.edu
Phone
859-323-8033
Organization name
University of Kentucky
Department
Molecular and Biomedical Pharmacology
Lab
Blalock
Street address
800 Rose St.
City
Lexington
State/province
KY
ZIP/Postal code
40475
Country
USA
Platform ID
GPL341
Series (1)
GSE9990
Transcriptional profiles of rodent hippocampal CA1 tissue during aging and cognitive decline
Data table header descriptions
ID_REF
Probe Set
VALUE
MAS5-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table
ID_REF
VALUE
ABS_CALL
1367452_at
3584.2
P
1367453_at
1584.5
P
1367454_at
1358.9
P
1367455_at
2687.2
P
1367456_at
2725.3
P
1367457_at
1733.5
P
1367458_at
586.8
P
1367459_at
9098.2
P
1367460_at
3930.8
P
1367461_at
985
P
1367462_at
2492.1
P
1367463_at
1264.8
P
1367464_at
874.2
P
1367465_at
1796.1
P
1367466_at
1550.2
P
1367467_at
1989.2
P
1367468_at
741.3
P
1367469_at
3052.7
P
1367470_at
2267.3
P
1367471_at
622.9
P
Total number of rows: 15923 Table truncated, full table size 290 Kbytes .Supplementary file
Size
Download
File type/resource
GSM252545.CEL.gz
2.5 Mb
(ftp) (http)
CEL
Processed data included within Sample table