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Sample GSM258516 Query DataSets for GSM258516
Status Public on Nov 03, 2009
Title HEK293_Normal_24h_Illumina
Sample type RNA
 
Source name Normal HEK293 cell
Organism Homo sapiens
Characteristics cell line: HEK293 human embryonic kidney cell line
protocol: control (untreated)
Extracted molecule total RNA
Extraction protocol Illumina TotalPrep RNA amplification kit (Ambion Catalog#IL1791)
Label Streptavidin Cy3
Label protocol As described in the illumina Human-6 chip processing protocol. Briefly, generation of biotin labelled cRNA from the product of RT cDNA synthesis and 2nd strand cDNA synthesis.
 
Hybridization protocol Refer to the Illumina Gene Expression System Manual
Scan protocol Refer to the Illumina Gene Expression System Manual
Description The untreated HEK293 cells
Data processing Cubic spline normalization using Illumina BeadStudio Version "BSGX Version3.2.3"
 
Submission date Jan 23, 2008
Last update date Mar 29, 2010
Contact name Lingfeng Liu
E-mail(s) liulingfeng1111@gmail.com
Phone +86-21-65643262
Organization name Fudan University
Department Life Science
Lab the State Key Laboratory of Genetic Engineering
Street address Handan Road 220#
City Shanghai
ZIP/Postal code 200433
Country China
 
Platform ID GPL6102
Series (1)
GSE10241 A Global Genomic View of MIF Knockdown Cell

Data table header descriptions
ID_REF
VALUE HEK293_Normal_24h_Illumina AVG_Signal

Data table
ID_REF VALUE
ILMN_1343289 23591.21
ILMN_1343290 13257.24
ILMN_1343291 34276.19
ILMN_1343292 2400.563
ILMN_1343293 29106.27
ILMN_1343294 26959.09
ILMN_1343295 25028.56
ILMN_1651199 57.05912
ILMN_1651209 138.9773
ILMN_1651210 61.60379
ILMN_1651217 63.02383
ILMN_1651221 69.82769
ILMN_1651228 3446.554
ILMN_1651229 391.7137
ILMN_1651232 271.1892
ILMN_1651234 57.18771
ILMN_1651235 87.93638
ILMN_1651236 85.79771
ILMN_1651237 2033.422
ILMN_1651238 59.83184

Total number of rows: 48702

Table truncated, full table size 1041 Kbytes.




Supplementary file Size Download File type/resource
GSM258516.txt.gz 343.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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