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GEO accession:
Sample GSM2599
Query DataSets for GSM2599
Status
Public on Nov 13, 2002
Title
D1_TP-12_I
Sample type
RNA
Source name
Human PBMC
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Donor 1 time point 12 hours
Post infection with HIV-1, RF
Submission date
Nov 13, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE511
Proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs InAvg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs InAvg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
10
2
19
0.5
9918.2
P
AFFX-BioB-M_at
15
0
19
0.75
9980.7
P
AFFX-BioB-3_at
8
0
19
0.4
7385.4
P
AFFX-BioC-5_at
17
0
19
0.85
26971
P
AFFX-BioC-3_at
16
0
20
0.8
33679.6
P
AFFX-BioDn-5_at
16
0
20
0.8
21413.2
P
AFFX-BioDn-3_at
17
1
18
0.85
76483.6
P
AFFX-CreX-5_at
20
0
20
1
269369.8
P
AFFX-CreX-3_at
19
0
20
0.95
326176.5
P
AFFX-BioB-5_st
6
3
18
0.3
2499.9
A
AFFX-BioB-M_st
5
3
17
0.25
1346.7
A
AFFX-BioB-3_st
4
6
18
0.2
-365.9
A
AFFX-BioC-5_st
4
6
18
0.2
-4650.6
A
AFFX-BioC-3_st
7
2
19
0.35
1673.5
A
AFFX-BioDn-5_st
7
3
19
0.35
3902.1
A
AFFX-BioDn-3_st
3
3
18
0.15
2330.2
A
AFFX-CreX-5_st
8
3
19
0.4
2062.5
A
AFFX-CreX-3_st
5
3
18
0.25
-603.7
A
hum_alu_at
56
0
69
0.81
297693.5
P
AFFX-DapX-5_at
4
4
19
0.2
-269
A
Total number of rows:
7129
Table truncated, full table size
220 Kbytes
.
Supplementary data files not provided
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