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GEO accession:
Sample GSM2611
Query DataSets for GSM2611
Status
Public on Nov 13, 2002
Title
D2_TP-24_C
Sample type
RNA
Source name
Human PBMC
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Donor 2 Time point 24 hours
Autologous Control (uninfected)
Submission date
Nov 13, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE511
Proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs InAvg
Trimmed probe pair set
Pos Fraction
positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs InAvg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
12
2
19
0.6
5540
P
AFFX-BioB-M_at
11
1
19
0.55
5042
P
AFFX-BioB-3_at
14
2
17
0.7
2279
P
AFFX-BioC-5_at
17
0
19
0.85
12399
P
AFFX-BioC-3_at
17
0
20
0.85
20052
P
AFFX-BioDn-5_at
16
0
19
0.8
6377
P
AFFX-BioDn-3_at
17
1
18
0.85
36734
P
AFFX-CreX-5_at
20
0
20
1
121715
P
AFFX-CreX-3_at
20
0
20
1
139932
P
AFFX-BioB-5_st
8
2
18
0.4
1402
A
AFFX-BioB-M_st
3
6
17
0.15
65
A
AFFX-BioB-3_st
5
8
19
0.25
-1844
A
AFFX-BioC-5_st
2
8
18
0.1
-3761
A
AFFX-BioC-3_st
6
3
19
0.3
1111
A
AFFX-BioDn-5_st
8
5
19
0.4
2035
A
AFFX-BioDn-3_st
6
3
19
0.3
1211
A
AFFX-CreX-5_st
8
4
19
0.4
794
A
AFFX-CreX-3_st
3
6
19
0.15
-2208
A
hum_alu_at
51
0
69
0.74
129827
P
AFFX-DapX-5_at
7
6
18
0.35
1344
A
Total number of rows:
7129
Table truncated, full table size
207 Kbytes
.
Supplementary data files not provided
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