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GEO accession:
Sample GSM2621
Query DataSets for GSM2621
Status
Public on Nov 13, 2002
Title
D3_TP-24_C
Sample type
RNA
Source name
Human PBMC
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Donor 3 Time point 24 hours
Autologous control (uninfected)
Submission date
Nov 13, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE511
Proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs InAvg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs InAvg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
17
1
20
0.85
32321
P
AFFX-BioB-M_at
19
0
19
0.95
39877
P
AFFX-BioB-3_at
16
2
17
0.8
47041
P
AFFX-BioC-5_at
19
0
19
0.95
92762
P
AFFX-BioC-3_at
19
0
20
0.95
100080
P
AFFX-BioDn-5_at
20
0
20
1
56745
P
AFFX-BioDn-3_at
18
0
19
0.9
185903
P
AFFX-CreX-5_at
18
0
20
0.9
309671
P
AFFX-CreX-3_at
14
0
20
0.7
282579
P
AFFX-BioB-5_st
7
4
18
0.35
4567
A
AFFX-BioB-M_st
5
1
18
0.25
1397
A
AFFX-BioB-3_st
5
6
19
0.25
-931
A
AFFX-BioC-5_st
5
4
18
0.25
1034
A
AFFX-BioC-3_st
6
2
18
0.3
1754
A
AFFX-BioDn-5_st
8
4
19
0.4
5788
A
AFFX-BioDn-3_st
6
1
19
0.3
2342
A
AFFX-CreX-5_st
7
3
18
0.35
3358
A
AFFX-CreX-3_st
6
5
18
0.3
-5323
A
hum_alu_at
55
0
69
0.8
297223
P
AFFX-DapX-5_at
6
4
18
0.3
5298
A
Total number of rows:
7129
Table truncated, full table size
207 Kbytes
.
Supplementary data files not provided
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