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GEO accession:
Sample GSM262281
Query DataSets for GSM262281
Status
Public on Jun 23, 2008
Title
30 min IL-3 stimulated BaF3 cells + Stat5 SiRNA_U74C
Sample type
RNA
Source name
30 min IL-3 stimulated BaF3 cells + Stat5 SiRNA
Organism
Mus musculus
Characteristics
30 min IL-3 stimulated BaF3 cells + Stat5 SiRNA
Extracted molecule
total RNA
Extraction protocol
RNeasy Maxi kit, including an on-column DNase I treatment (Qiagen)
Label
biotinylation
Label protocol
Affymetrix Protocol
Hybridization protocol
Affymetrix Protocol
Scan protocol
Affymetrix Protocol
Description
na
Data processing
MAS5.0
Submission date
Feb 04, 2008
Last update date
Jun 23, 2008
Contact name
Anne Rascle
E-mail(s)
anne.rascle@vkl.uni-regensburg.de
Phone
+49 (0)941 2806598
Organization name
University of Regensburg
Street address
Universitaetsstrasse
City
Regensburg
ZIP/Postal code
93053
Country
Germany
Platform ID
GPL83
Series (1)
GSE10389
Identification of Stat5 Target Genes by siRNA-mediated knockdown
Data table header descriptions
ID_REF
VALUE
value
ABS_CALL
absent call
DETECTION P-VALUE
detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
22.5394
A
0.921998
AFFX-MurIL10_at
56.2864
A
0.51489
AFFX-MurIL4_at
48.1501
A
0.156732
AFFX-MurFAS_at
264.688
P
0.00618711
AFFX-BioB-5_at
729.526
P
0.00227496
AFFX-BioB-M_at
1370.69
P
4.42873e-05
AFFX-BioB-3_at
831.872
P
7.00668e-05
AFFX-BioC-5_at
1943.44
P
0.000224668
AFFX-BioC-3_at
1712.95
P
4.42873e-05
AFFX-BioDn-5_at
2300.84
P
4.42873e-05
AFFX-BioDn-3_at
13531.9
P
7.00668e-05
AFFX-CreX-5_at
25323.5
P
4.42873e-05
AFFX-CreX-3_at
36706.7
P
4.42873e-05
AFFX-BioB-5_st
74.8298
A
0.313723
AFFX-BioB-M_st
109.306
A
0.470241
AFFX-BioB-3_st
35.8191
A
0.783476
AFFX-BioC-5_st
23.617
A
0.852061
AFFX-BioC-3_st
23.5312
A
0.659339
AFFX-BioDn-5_st
348.495
A
0.195266
AFFX-BioDn-3_st
248.358
A
0.083592
Total number of rows:
11934
Table truncated, full table size
348 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM262281.CEL.gz
2.6 Mb
(ftp)
(http)
CEL
GSM262281.CHP.gz
4.3 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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