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Sample GSM262762 Query DataSets for GSM262762
Status Public on Jul 07, 2008
Title C57BL/6 iron-balanced (C57WT43)
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics strain:C57BL/6
gender:male
age:7 weeks
diet: iron-balanced(200mg iron/kg)
Extracted molecule total RNA
Extraction protocol RNeasy Lipid Tissue Kit (Qiagen)
Label Cy3
Label protocol Agilent's Low RNA Input Linear Amplification Kit PLUS (One-color)
 
Hybridization protocol Agilent's standard protocol
Scan protocol Agilent's scanner
Description Information from probe features was extracted from microarray scan images using the Agilent Feature Extraction software v.9.5.1.
Data processing As recommended by the manufacturer
 
Submission date Feb 06, 2008
Last update date Jul 07, 2008
Contact name Marie-Paule Roth
E-mail(s) roth@cict.fr
Phone 33 5 62744508
Fax 33 5 62744558
Organization name Inserm
Department U563
Lab Génétique
Street address Chu Purpan
City Toulouse
ZIP/Postal code 31024
Country France
 
Platform ID GPL4134
Series (1)
GSE10421 Liver expression of Bmp6, Smad7, Id1 and Atoh8 is regulated by iron stores

Data table header descriptions
ID_REF
VALUE gProcessedSignal : signal post-dye normalization and post-surrogate processing in the green channel
gIsWellAboveBG 1 if the feature background-subtracted signal is significantly bigger than the noise of its background (i.e. > 2.6 the background standard deviation); 0 otherwise

Data table
ID_REF VALUE gIsWellAboveBG
1 1.861563e+005 1
2 -6.742243e+000 0
3 -1.074381e+000 0
4 -1.413107e+000 0
5 -4.349730e+000 0
6 -3.163716e+000 0
7 1.853739e-001 0
8 -2.404332e+000 0
9 -3.261625e+000 0
10 -3.025926e-001 0
11 -2.904369e+000 0
12 -7.051674e-001 0
13 2.137076e+002 1
14 3.430310e+001 1
15 6.867142e+001 1
16 1.569658e+002 1
18 2.064820e+000 0
19 -1.630536e+000 0
20 2.170600e+001 1
21 2.856355e+001 1

Total number of rows: 45018

Table truncated, full table size 962 Kbytes.




Supplementary file Size Download File type/resource
GSM262762.txt.gz 6.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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