|
Status |
Public on May 17, 2017 |
Title |
Colon_Tumor_17777 |
Sample type |
genomic |
|
|
Source name |
colon tumor
|
Organism |
Homo sapiens |
Characteristics |
tissue: colon cancer
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Standard Illumina Protocol
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
200079600011_R03C01
|
Data processing |
Background subtraction and dye bias correction Unmethylated and methylated signal intensities
|
|
|
Submission date |
May 16, 2017 |
Last update date |
Jan 23, 2018 |
Contact name |
Wanding Zhou |
Organization name |
Children's Hospital of Philadelphia
|
Department |
Pathology and Lab Medicine
|
Street address |
3501 Civic Center Blvd
|
City |
Philadelphia |
State/province |
PA |
ZIP/Postal code |
19104 |
Country |
USA |
|
|
Platform ID |
GPL21145 |
Series (1) |
GSE98990 |
DNA methylation of human colorectal cancer and HeLa sample |
|