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Sample GSM264759 Query DataSets for GSM264759
Status Public on Sep 30, 2008
Title Regulation of the RPE (retinal pigment epithelium) transcriptome by the neural retina (E7SF3-3)
Sample type RNA
 
Source name Retinal Pigment Epithelium
Organism Gallus gallus
Characteristics E7 cells in basal media
Extracted molecule total RNA
Extraction protocol RNeasy Protect^ kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol standard
Scan protocol standard
Description N/A
Data processing signal value generated from global scaling
 
Submission date Feb 11, 2008
Last update date Sep 30, 2008
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE10538 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina

Data table header descriptions
ID_REF
VALUE MAS5 value
ABS_CALL present/absent
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 439.18 P 0.000581214
AFFX-BioB-M_at 585.499 P 4.42873e-05
AFFX-BioB-3_at 438.154 P 7.00668e-05
AFFX-BioC-5_at 1549.02 P 5.16732e-05
AFFX-BioC-3_at 1457.5 P 4.42873e-05
AFFX-BioDn-5_at 3150.61 P 4.42873e-05
AFFX-BioDn-3_at 6363.15 P 6.02111e-05
AFFX-CreX-5_at 18288.5 P 4.42873e-05
AFFX-CreX-3_at 21866 P 4.42873e-05
AFFX-DapX-5_at 1.99057 A 0.916408
AFFX-DapX-M_at 18.2075 A 0.631573
AFFX-DapX-3_at 7.55488 A 0.860518
AFFX-LysX-5_at 9.00988 A 0.645547
AFFX-LysX-M_at 11.0319 A 0.852061
AFFX-LysX-3_at 15.493 A 0.470241
AFFX-PheX-5_at 3.60425 A 0.834139
AFFX-PheX-M_at 3.04115 A 0.969024
AFFX-PheX-3_at 12.7315 A 0.712257
AFFX-ThrX-5_at 6.87376 A 0.84329
AFFX-ThrX-M_at 11.3945 A 0.783476

Total number of rows: 38535

Table truncated, full table size 1493 Kbytes.




Supplementary file Size Download File type/resource
GSM264759.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM264759.CHP.gz 207.4 Kb (ftp)(http) CHP
Processed data included within Sample table

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