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Sample GSM265371 Query DataSets for GSM265371
Status Public on Sep 30, 2008
Title Regulation of the RPE (retinal pigment epithelium) transcriptome by the neural retina (E7RCSF3-1)
Sample type RNA
 
Source name retinal pigment epithelium
Organism Gallus gallus
Characteristics E7 RPE in basal medium supplemented with retinal conditioned medium
Extracted molecule total RNA
Extraction protocol RNeasy Protect^ kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol standard
Scan protocol standard
Description N/A
Data processing signal value generated from global scaling
 
Submission date Feb 12, 2008
Last update date Sep 30, 2008
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE10538 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina

Data table header descriptions
ID_REF
VALUE MAS5 value
ABS_CALL absent/present
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 432.474 P 0.000389797
AFFX-BioB-M_at 685.498 P 4.42873e-05
AFFX-BioB-3_at 461.119 P 4.42873e-05
AFFX-BioC-5_at 1482.1 P 5.16732e-05
AFFX-BioC-3_at 1492.63 P 5.16732e-05
AFFX-BioDn-5_at 3424.57 P 4.42873e-05
AFFX-BioDn-3_at 6044.59 P 6.02111e-05
AFFX-CreX-5_at 18275.7 P 5.16732e-05
AFFX-CreX-3_at 23389 P 4.42873e-05
AFFX-DapX-5_at 25.8111 A 0.300606
AFFX-DapX-M_at 28.9922 A 0.425962
AFFX-DapX-3_at 40.9718 A 0.354453
AFFX-LysX-5_at 11.8559 A 0.686292
AFFX-LysX-M_at 13.5677 A 0.843353
AFFX-LysX-3_at 24.6501 A 0.165861
AFFX-PheX-5_at 3.54039 A 0.904333
AFFX-PheX-M_at 1.60573 A 0.986189
AFFX-PheX-3_at 47.2377 A 0.5
AFFX-ThrX-5_at 19.3923 A 0.58862
AFFX-ThrX-M_at 2.69128 A 0.897855

Total number of rows: 38535

Table truncated, full table size 1493 Kbytes.




Supplementary file Size Download File type/resource
GSM265371.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM265371.CHP.gz 208.1 Kb (ftp)(http) CHP
Processed data included within Sample table

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