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Sample GSM266120 Query DataSets for GSM266120
Status Public on Sep 30, 2008
Title Regulation of the RPE (retinal pigment epithelium) transcriptome by the neural retina (E14SF3-2)
Sample type RNA
 
Source name retinal pigment epithelium
Organism Gallus gallus
Characteristics E14 RPE in basal medium
Extracted molecule total RNA
Extraction protocol RNeasy Protect^ kit (Qiagen)
Label biotin-U
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol standard
Scan protocol standard
Description N/A
Data processing signal value generated from global scaling
 
Submission date Feb 15, 2008
Last update date Sep 30, 2008
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE10538 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina

Data table header descriptions
ID_REF
VALUE MAS5 value
ABS_CALL absent/present
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 323.573 P 0.000753643
AFFX-BioB-M_at 497.104 P 5.16732e-05
AFFX-BioB-3_at 415.79 P 7.00668e-05
AFFX-BioC-5_at 1308.08 P 5.16732e-05
AFFX-BioC-3_at 1312.9 P 4.42873e-05
AFFX-BioDn-5_at 2489.37 P 4.42873e-05
AFFX-BioDn-3_at 5493.16 P 8.14279e-05
AFFX-CreX-5_at 15083.2 P 4.42873e-05
AFFX-CreX-3_at 19642.5 P 4.42873e-05
AFFX-DapX-5_at 34.5124 A 0.185131
AFFX-DapX-M_at 26.4267 A 0.48511
AFFX-DapX-3_at 12.5459 A 0.760937
AFFX-LysX-5_at 2.90072 A 0.932322
AFFX-LysX-M_at 13.4915 A 0.860518
AFFX-LysX-3_at 21.5397 A 0.239063
AFFX-PheX-5_at 1.59039 A 0.999246
AFFX-PheX-M_at 8.07924 A 0.794268
AFFX-PheX-3_at 16.2867 A 0.659339
AFFX-ThrX-5_at 6.41204 A 0.9273
AFFX-ThrX-M_at 30.5438 A 0.368438

Total number of rows: 38535

Table truncated, full table size 1490 Kbytes.




Supplementary file Size Download File type/resource
GSM266120.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM266120.CHP.gz 207.1 Kb (ftp)(http) CHP
Processed data included within Sample table

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