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Sample GSM266123 Query DataSets for GSM266123
Status Public on Sep 30, 2008
Title Regulation of the RPE (retinal pigment epithelium) transcriptome by the neural retina (E14SF3-SER-1)
Sample type RNA
 
Source name retinal pigment epithelium
Organism Gallus gallus
Characteristics E14 RPE in basal medium supplemented with 2% fetal bovine serum
Extracted molecule total RNA
Extraction protocol RNeasy Protect^ kit (Qiagen)
Label biotin-U
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol standard
Scan protocol standard
Description N/A
Data processing signal value generated from global scaling
 
Submission date Feb 15, 2008
Last update date Sep 30, 2008
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE10538 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina

Data table header descriptions
ID_REF
VALUE MAS5 value
ABS_CALL absent/present
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 354.99 P 0.000753643
AFFX-BioB-M_at 504.886 P 6.02111e-05
AFFX-BioB-3_at 339.796 P 7.00668e-05
AFFX-BioC-5_at 1059.97 P 5.16732e-05
AFFX-BioC-3_at 1096.66 P 4.42873e-05
AFFX-BioDn-5_at 2392.54 P 4.42873e-05
AFFX-BioDn-3_at 5338.86 P 0.00010954
AFFX-CreX-5_at 13361.8 P 5.16732e-05
AFFX-CreX-3_at 16821.9 P 4.42873e-05
AFFX-DapX-5_at 4.65681 A 0.804734
AFFX-DapX-M_at 27.0889 A 0.340661
AFFX-DapX-3_at 6.5385 A 0.712257
AFFX-LysX-5_at 26.9082 P 0.0429619
AFFX-LysX-M_at 28.242 A 0.824672
AFFX-LysX-3_at 12.5809 A 0.239063
AFFX-PheX-5_at 2.21861 A 0.794268
AFFX-PheX-M_at 1.93084 A 0.949771
AFFX-PheX-3_at 37.3645 A 0.455413
AFFX-ThrX-5_at 5.66513 A 0.699394
AFFX-ThrX-M_at 3.81946 A 0.772383

Total number of rows: 38535

Table truncated, full table size 1493 Kbytes.




Supplementary file Size Download File type/resource
GSM266123.CEL.gz 3.6 Mb (ftp)(http) CEL
GSM266123.CHP.gz 207.6 Kb (ftp)(http) CHP
Processed data included within Sample table

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