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Sample GSM266704 Query DataSets for GSM266704
Status Public on Sep 30, 2008
Title Regulation of the RPE (retinal pigment epithelium) transcriptome by the neural retina (E14SF3-SER-2)
Sample type RNA
 
Source name retinal pigment epithelium
Organism Gallus gallus
Characteristics E14 RPE in basal medium supplemented with 2% fetal bovine serum
Extracted molecule total RNA
Extraction protocol RNeasy Protect^ kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol standard
Scan protocol standard
Description N/A
Data processing signal value generated from global scaling
 
Submission date Feb 15, 2008
Last update date Sep 30, 2008
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE10538 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina

Data table header descriptions
ID_REF
VALUE MAS5 value
ABS_CALL absent/present
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 396.758 P 0.000662269
AFFX-BioB-M_at 542.032 P 4.42873e-05
AFFX-BioB-3_at 334.616 P 4.42873e-05
AFFX-BioC-5_at 1420.81 P 5.16732e-05
AFFX-BioC-3_at 1275.19 P 5.16732e-05
AFFX-BioDn-5_at 2721.78 P 4.42873e-05
AFFX-BioDn-3_at 6324.07 P 0.000126798
AFFX-CreX-5_at 15748.4 P 5.16732e-05
AFFX-CreX-3_at 19497.2 P 4.42873e-05
AFFX-DapX-5_at 17.3503 A 0.340661
AFFX-DapX-M_at 13.7493 A 0.645572
AFFX-DapX-3_at 24.7534 A 0.659339
AFFX-LysX-5_at 12.783 A 0.559354
AFFX-LysX-M_at 22.1114 A 0.794268
AFFX-LysX-3_at 22.3707 A 0.165861
AFFX-PheX-5_at 17.6128 A 0.659339
AFFX-PheX-M_at 9.25832 A 0.868639
AFFX-PheX-3_at 11.2717 A 0.672921
AFFX-ThrX-5_at 5.46167 A 0.876428
AFFX-ThrX-M_at 23.1962 A 0.250796

Total number of rows: 38535

Table truncated, full table size 1493 Kbytes.




Supplementary file Size Download File type/resource
GSM266704.CEL.gz 3.6 Mb (ftp)(http) CEL
GSM266704.CHP.gz 207.4 Kb (ftp)(http) CHP
Processed data included within Sample table

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