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GEO accession:
Sample GSM266810
Query DataSets for GSM266810
Status
Public on Feb 21, 2008
Title
Rhesus macaque ileal loop study MK6 LB
Sample type
RNA
Source name
ileum
Organism
Macaca mulatta
Characteristics
adult male
Extracted molecule
total RNA
Extraction protocol
Trizol extraction protocol
Label
phycoerythrin
Label protocol
Affymetrix One-cycle labeling protocol
Hybridization protocol
Affymetrix protocol, O/N
Scan protocol
Affymetrix scanner 3000
Description
whole tissue
Data processing
GCOS
Submission date
Feb 19, 2008
Last update date
Feb 20, 2008
Contact name
Michael George
E-mail(s)
mdgeorge@ucdavis.edu
Organization name
University of California, Davis
Department
Medical Microbiology and Immunology
Street address
451 Health Sciences Drive
City
Davis
State/province
CA
ZIP/Postal code
95616
Country
USA
Platform ID
GPL3535
Series (1)
GSE10567
Rhesus macaque ileal loop study
Data table header descriptions
ID_REF
VALUE
fluorescence intensity
ABS_CALL
presence or absence call
DETECTION P-VALUE
confidence in presence call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
87.09
P
0.000126798
AFFX-BioB-M_at
158.698
P
4.42873e-05
AFFX-BioB-3_at
99.0642
P
4.42873e-05
AFFX-BioC-5_at
103.277
P
7.00668e-05
AFFX-BioC-3_at
96.2663
P
5.16732e-05
AFFX-BioDn-5_at
798.445
P
4.42873e-05
AFFX-BioDn-3_at
1354
P
4.42873e-05
AFFX-CreX-5_at
2961.88
P
4.42873e-05
AFFX-CreX-3_at
3850.12
P
4.42873e-05
AFFX-DapX-5_at
1.32777
A
0.645584
AFFX-DapX-M_at
0.33979
A
0.976071
AFFX-DapX-3_at
0.36798
A
0.945787
AFFX-LysX-5_at
0.236154
A
0.957038
AFFX-LysX-M_at
0.242409
A
0.937071
AFFX-LysX-3_at
3.07212
A
0.216424
AFFX-PheX-5_at
0.279024
A
0.672977
AFFX-PheX-M_at
0.242122
A
0.960405
AFFX-PheX-3_at
1.2906
A
0.824693
AFFX-ThrX-5_at
3.12979
A
0.659352
AFFX-ThrX-M_at
0.110494
A
0.969035
Total number of rows:
52865
Table truncated, full table size
2146 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM266810.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
GSM266810.CHP.gz
313.3 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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