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Sample GSM266873 Query DataSets for GSM266873
Status Public on Sep 29, 2008
Title Construct Q74 Line 4 1 days (Q74_1_4_2)
Sample type RNA
 
Source name PC12 cell culture
Organism Rattus norvegicus
Characteristics Construct: Q74, Line 4
Time after induction: 1 days
Treatment protocol Cells were treated with 1ug /ml doxycylin for the indicated number of days
Growth protocol RNA was isolated from one 9 cm petriddish
Extracted molecule total RNA
Extraction protocol RNA was isolated with the RNeasy kit
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Gene expression data from PC12 cells stably transfected with a doxycylin-inducible exon1 huntingtin fragment with normal-sized or elongated glutamine stretch
Data processing Non-background corrected average intensities across all replicate beads (obtained from Beadstudio) were normalized with vsn
 
Submission date Feb 20, 2008
Last update date Sep 29, 2008
Contact name Peter A.C. 't Hoen
E-mail(s) p.a.c.hoen@lumc.nl
Phone +31 71 5269421
Fax +31 71 5268285
URL http://www.humgen.nl
Organization name Leiden University Medical Center
Department Center for Human and Clinical Genetics
Street address PO Box 9600
City Leiden
ZIP/Postal code 2300 RC
Country Netherlands
 
Platform ID GPL6101
Series (1)
GSE10581 Nrf2-related oxidative stress response and impaired dopamine biosynthesis in a PC12 cell model of Huntington’s disease

Data table header descriptions
ID_REF
VALUE vsn normalized signal intensity

Data table
ID_REF VALUE
ILMN_1530370 4.582131945
ILMN_1530315 4.513014165
ILMN_1530343 5.579066403
ILMN_1530298 4.539293687
ILMN_1530312 4.497922681
ILMN_1530206 4.499610803
ILMN_1530174 4.458287883
ILMN_1530328 4.391035548
ILMN_1530537 4.338937833
ILMN_1530412 4.328985009
ILMN_1530540 4.461797433
ILMN_1530418 4.63947377
ILMN_1530355 4.516337122
ILMN_1530438 4.632114022
ILMN_1530180 5.73772022
ILMN_1530219 4.569629323
ILMN_1530535 4.704756826
ILMN_1530429 4.436967921
ILMN_1530449 4.316909369
ILMN_1530434 4.411506173

Total number of rows: 22521

Table truncated, full table size 547 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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