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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C3H_T04_HF_03
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.739412
106
109.741
75
74.8022
261.5
269.483
36
36.4067
2
-0.247438
83
82.4915
74
73.9613
73
74.6271
35
35.0211
3
-0.317593
139.5
138.317
73
73.7636
222
225.367
34
34.1491
4
-0.253176
182
183.629
73
73.3686
343
337.419
34
34.1861
5
-0.853501
98
98.7857
75
74.9856
215
217.5
35
34.787
6
0.105685
132.5
131.339
72.5
72.831
112
112.268
35
35.0966
7
-1.33806
108
111.41
75
74.5442
1073
1075.57
36
36.2686
8
0.215193
112
111.825
74
74.1191
84
85.0702
36
35.5596
9
0.328471
87.5
88.431
73
73.1806
66
66.8276
35
34.7569
10
0.0779845
116
117.016
72
72.318
100
100.541
35
35.2862
11
0.0301018
106
107.789
74
74.4326
92
93.0877
37
36.6206
12
0.150185
99
99.7627
74
73.9283
79
80.2203
37
37.0792
13
0.0627138
163
162.271
75
75.1901
155
156.458
37
36.6796
14
-1.23983
123
125.089
74
74.1796
1270.5
1264.84
36
36.5951
15
-0.121046
97
98.6441
74
73.777
92
92
36
36.7282
16
0.0978132
109
109.15
74
74.3529
87
90.25
37
36.6436
17
0.0846667
95
93.3929
74
74.1254
75
75.7857
36
36.1882
18
0.0913745
120
119.679
73
72.7183
102
102.714
36
36.2817
19
-0.0596496
99
100.881
73
73.741
91
90.7288
36
36.0899
20
0.0455199
102
102.721
74
74.4913
87
86.2951
36
36.4077
Total number of rows: 21446 Table truncated, full table size 1297 Kbytes .Supplementary data files not provided