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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C57_T08_HF_01
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.773947
145
145.823
73
72.5201
928
924.935
35
34.5897
2
0
82.5
81.6034
72
72.457
77
76.8793
34
34.1271
3
-0.249352
244
241.741
71
71.8412
673
669.345
34
33.9422
4
-0.15173
355
353.864
71
71.6213
830
836.61
34
34.0588
5
-0.31754
173
176.327
72
71.1851
515
514.073
34
34.5196
6
0.237052
181.5
180.117
71
71.4772
201.5
201.433
35
34.5333
7
-0.873107
131
130.873
70
70.9258
936
942
34
34.2756
8
0.132593
98
99.6667
71
70.5816
107.5
108.722
34
33.805
9
0
84
83.5397
72
71.9036
85
86.6032
34
34.4429
10
0.0394933
183.5
189
72
72.3102
292.5
292.857
35
35.2701
11
0.0662808
111
112.246
72
71.7153
136
136.947
35
34.9751
12
0.00666272
96
97.9355
72
72.1841
115
115.952
36
35.7545
13
0.000920932
231
230.947
72
71.9531
401
399.228
36
36.2383
14
-0.863412
135
135.525
72
72.6725
966
966.305
36
35.8239
15
0.0708349
151
154.902
72
72.3574
210
214.246
36
35.7004
16
-0.153912
90
88.9016
73
72.8592
105
106.426
36
36.3169
17
-0.158303
85.5
86.6379
72
71.6064
103
103.931
36
36.4149
18
0.449416
208
206.102
71
71.0249
178
174.271
37
36.5765
19
0.00442307
150
150.417
70
70.7934
234.5
231.833
36
36.1845
20
-0.0355504
95.5
95.3462
72
72.1254
115
114.673
36
36.0105
Total number of rows: 21446 Table truncated, full table size 1301 Kbytes .Supplementary data files not provided