|
Status |
Public on Mar 08, 2008 |
Title |
WT_c_CB_3 |
Sample type |
RNA |
|
|
Source name |
WT mouse, control-treated
|
Organism |
Mus musculus |
Characteristics |
Cerebellum from WT mouse, control-treated, replicate #3
|
Extracted molecule |
total RNA |
Extraction protocol |
RNeasy Lipid Tissue Mini Kit (Qiagen)
|
Label |
Biotin
|
Label protocol |
According to Illumina Protocol
|
|
|
Hybridization protocol |
According to Illumina Protocol
|
Scan protocol |
Illumina BeadScan
|
Description |
1729240087_F: array designation within the raw data file linked to the Series record
|
Data processing |
Raw data was analyzed using Bioconductor packages
(www.bioconductor.org). Data was normalized using quantile
normalization. Analysis of differential expression was performed using a
linear model fitting (LIMMA package, Smyth 2005).
|
|
|
Submission date |
Mar 05, 2008 |
Last update date |
Mar 07, 2008 |
Contact name |
Giovanni Coppola |
E-mail(s) |
gcoppola@ucla.edu
|
Phone |
310-794-4172
|
Organization name |
UCLA
|
Department |
Psychiatry and Neurology
|
Lab |
Neurogenetics
|
Street address |
1524 Gonda, 695 Charles Young Drive South
|
City |
Los Angeles |
State/province |
CA |
ZIP/Postal code |
90095 |
Country |
USA |
|
|
Platform ID |
GPL6103 |
Series (1) |
GSE10745 |
HDAC Inhibitors Correct Frataxin Deficiency in a Friedreich Ataxia Mouse Model |
|