|
Status |
Public on Dec 01, 2018 |
Title |
Case5_1 |
Sample type |
genomic |
|
|
Source name |
Prostectomy 1_normal prostate sample
|
Organism |
Homo sapiens |
Characteristics |
gender: Male sample type: Prostectomy 1 disease state: Normal
|
Extracted molecule |
genomic DNA |
Extraction protocol |
DNA was extracted and purified from fresh/frozen prostate tissue samples using Qiagen DNA/RNA Kit according to standard instructions
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
normal prostate sample
|
Data processing |
minfi R
|
|
|
Submission date |
Jul 26, 2017 |
Last update date |
Dec 01, 2018 |
Contact name |
Richard Marais |
Organization name |
Cancer Research UK Manchester Institute
|
Department |
Molecular Oncology
|
Street address |
Wilmslow Road
|
City |
Manchester |
ZIP/Postal code |
M20 4GJ |
Country |
United Kingdom |
|
|
Platform ID |
GPL21145 |
Series (1) |
GSE101908 |
Genomic Evaluation of Multiparametric Magnetic Resonance Imaging -visible and -nonvisible Lesions in Clinically Localized Prostate Cancer |
|