NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2788 Query DataSets for GSM2788
Status Public on Nov 21, 2002
Title Mnk_3142-T-3
Sample type RNA
 
Source name PBMC from Rhesus Macaque
Organism Macaca mulatta
Extracted molecule total RNA
 
Description Animal #3142
Typical progression group
Three weeks Post infection with SIV MAC251
 
Submission date Nov 21, 2002
Last update date May 27, 2005
Contact name Maryanne Vahey
E-mail(s) mvahey@hivresearch.org
Phone 301-251-5058
Fax 301-762-7460
Organization name Walter Reed Army Institute of Research
Department
Lab Laboratory of Functional Genomics
Street address 1600 East Gude Drive
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
 
Platform ID GPL80
Series (1)
GSE512 Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251

Data table header descriptions
ID_REF
Positive Number of positive probe pairs
Negative Number of negative probe pairs
Pairs In Avg Trimmed probe pair set
Pos Fraction Positive/pairs used
VALUE Average difference intensity
ABS_CALL Absolute call of Presence or Absence of gene transcript in sample

Data table
ID_REF Positive Negative Pairs In Avg Pos Fraction VALUE ABS_CALL
AFFX-BioB-5_at 17 1 18 0.85 27045.1 P
AFFX-BioB-M_at 20 0 20 1 39607.5 P
AFFX-BioB-3_at 18 0 19 0.9 27919.8 P
AFFX-BioC-5_at 18 0 19 0.9 74428.1 P
AFFX-BioC-3_at 19 0 20 0.95 78046.6 P
AFFX-BioDn-5_at 19 0 20 0.95 38827.6 P
AFFX-BioDn-3_at 18 0 18 0.9 109770.8 P
AFFX-CreX-5_at 20 0 20 1 493153.4 P
AFFX-CreX-3_at 20 0 20 1 607720.4 P
AFFX-BioB-5_st 5 5 19 0.25 2796.5 A
AFFX-BioB-M_st 6 4 18 0.3 782.8 A
AFFX-BioB-3_st 5 7 20 0.25 -2641 A
AFFX-BioC-5_st 2 5 17 0.1 -678.5 A
AFFX-BioC-3_st 7 7 19 0.35 195.1 A
AFFX-BioDn-5_st 6 6 19 0.3 4021.4 A
AFFX-BioDn-3_st 5 4 19 0.25 3532.5 A
AFFX-CreX-5_st 7 2 18 0.35 3552 P
AFFX-CreX-3_st 7 5 18 0.35 3122.3 A
hum_alu_at 67 0 69 0.97 1352652.3 P
AFFX-DapX-5_at 4 1 18 0.2 183.1 A

Total number of rows: 7129

Table truncated, full table size 219 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap