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GEO accession:
Sample GSM2790
Query DataSets for GSM2790
Status
Public on Nov 21, 2002
Title
Mnk_3142-T-B
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3142
Typical progression group
Baseline Uninfected sample
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
14
3
18
0.7
42179.7
P
AFFX-BioB-M_at
14
1
20
0.7
40948.6
P
AFFX-BioB-3_at
9
4
19
0.45
21403.3
A
AFFX-BioC-5_at
16
0
19
0.8
68707.4
P
AFFX-BioC-3_at
18
0
20
0.9
65866.1
P
AFFX-BioDn-5_at
17
0
19
0.85
42039.4
P
AFFX-BioDn-3_at
15
1
18
0.75
122855.3
P
AFFX-CreX-5_at
19
0
20
0.95
628474.4
P
AFFX-CreX-3_at
20
0
20
1
701848.6
P
AFFX-BioB-5_st
9
4
19
0.45
5186.6
A
AFFX-BioB-M_st
6
7
19
0.3
2472.1
A
AFFX-BioB-3_st
5
10
20
0.25
-6694
A
AFFX-BioC-5_st
4
11
17
0.2
-6179.5
A
AFFX-BioC-3_st
6
6
18
0.3
-356.9
A
AFFX-BioDn-5_st
5
7
19
0.25
1130
A
AFFX-BioDn-3_st
5
4
18
0.25
4033.9
A
AFFX-CreX-5_st
6
5
19
0.3
2093
A
AFFX-CreX-3_st
7
6
19
0.35
3182
A
hum_alu_at
61
0
69
0.88
1446055.4
P
AFFX-DapX-5_at
8
4
18
0.4
15780.1
A
Total number of rows:
7129
Table truncated, full table size
223 Kbytes
.
Supplementary data files not provided
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