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Sample GSM2790 Query DataSets for GSM2790
Status Public on Nov 21, 2002
Title Mnk_3142-T-B
Sample type RNA
 
Source name PBMC from Rhesus Macaque
Organism Macaca mulatta
Extracted molecule total RNA
 
Description Animal #3142
Typical progression group
Baseline Uninfected sample
 
Submission date Nov 21, 2002
Last update date May 27, 2005
Contact name Maryanne Vahey
E-mail(s) mvahey@hivresearch.org
Phone 301-251-5058
Fax 301-762-7460
Organization name Walter Reed Army Institute of Research
Department
Lab Laboratory of Functional Genomics
Street address 1600 East Gude Drive
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
 
Platform ID GPL80
Series (1)
GSE512 Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251

Data table header descriptions
ID_REF
Positive Number of positive probe pairs
Negative Number of negative probe pairs
Pairs In Avg Trimmed probe pair set
Pos Fraction Positive/pairs used
VALUE Average difference intensity
ABS_CALL Absolute call of Presence or Absence of gene transcript in sample

Data table
ID_REF Positive Negative Pairs In Avg Pos Fraction VALUE ABS_CALL
AFFX-BioB-5_at 14 3 18 0.7 42179.7 P
AFFX-BioB-M_at 14 1 20 0.7 40948.6 P
AFFX-BioB-3_at 9 4 19 0.45 21403.3 A
AFFX-BioC-5_at 16 0 19 0.8 68707.4 P
AFFX-BioC-3_at 18 0 20 0.9 65866.1 P
AFFX-BioDn-5_at 17 0 19 0.85 42039.4 P
AFFX-BioDn-3_at 15 1 18 0.75 122855.3 P
AFFX-CreX-5_at 19 0 20 0.95 628474.4 P
AFFX-CreX-3_at 20 0 20 1 701848.6 P
AFFX-BioB-5_st 9 4 19 0.45 5186.6 A
AFFX-BioB-M_st 6 7 19 0.3 2472.1 A
AFFX-BioB-3_st 5 10 20 0.25 -6694 A
AFFX-BioC-5_st 4 11 17 0.2 -6179.5 A
AFFX-BioC-3_st 6 6 18 0.3 -356.9 A
AFFX-BioDn-5_st 5 7 19 0.25 1130 A
AFFX-BioDn-3_st 5 4 18 0.25 4033.9 A
AFFX-CreX-5_st 6 5 19 0.3 2093 A
AFFX-CreX-3_st 7 6 19 0.35 3182 A
hum_alu_at 61 0 69 0.88 1446055.4 P
AFFX-DapX-5_at 8 4 18 0.4 15780.1 A

Total number of rows: 7129

Table truncated, full table size 223 Kbytes.




Supplementary data files not provided

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