GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM2795
Query DataSets for GSM2795
Status
Public on Nov 21, 2002
Title
Mnk_3176-R-7
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3176
Rapid progression group
Seven weeks Post Infection with SIV MAC251
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
19
1
20
0.95
97583.5
P
AFFX-BioB-M_at
19
0
19
0.95
148100.8
P
AFFX-BioB-3_at
19
0
20
0.95
129493.7
P
AFFX-BioC-5_at
20
0
19
1
249763.9
P
AFFX-BioC-3_at
20
0
20
1
254799.5
P
AFFX-BioDn-5_at
20
0
20
1
152862.7
P
AFFX-BioDn-3_at
18
0
20
0.9
413028.2
P
AFFX-CreX-5_at
20
0
20
1
1434761.5
P
AFFX-CreX-3_at
20
0
20
1
1683609.6
P
AFFX-BioB-5_st
4
4
19
0.2
2419
A
AFFX-BioB-M_st
4
2
18
0.2
721.2
A
AFFX-BioB-3_st
4
5
20
0.2
-3193.6
A
AFFX-BioC-5_st
5
4
18
0.25
-2606.7
A
AFFX-BioC-3_st
4
4
17
0.2
-394.3
A
AFFX-BioDn-5_st
5
2
19
0.25
9466
A
AFFX-BioDn-3_st
8
0
19
0.4
6752.5
P
AFFX-CreX-5_st
7
2
19
0.35
5854.5
M
AFFX-CreX-3_st
11
3
18
0.55
8120.7
P
hum_alu_at
68
0
69
0.99
-2032871.3
P
AFFX-DapX-5_at
3
1
19
0.15
809.6
A
Total number of rows:
7129
Table truncated, full table size
220 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
