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GEO accession:
Sample GSM2799
Query DataSets for GSM2799
Status
Public on Nov 21, 2002
Title
Mnk_3201-R-B
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3201
Rapid progression group
Baseline Un-Infected sample
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
19
1
18
0.95
44294.5
P
AFFX-BioB-M_at
19
0
20
0.95
68081.5
P
AFFX-BioB-3_at
19
0
19
0.95
48804.7
P
AFFX-BioC-5_at
19
0
19
0.95
124578.5
P
AFFX-BioC-3_at
19
0
20
0.95
135874.7
P
AFFX-BioDn-5_at
18
0
20
0.9
70905.2
P
AFFX-BioDn-3_at
18
0
19
0.9
190204.7
P
AFFX-CreX-5_at
19
0
20
0.95
895829.1
P
AFFX-CreX-3_at
20
0
20
1
1095963.4
P
AFFX-BioB-5_st
6
4
19
0.3
3218.5
A
AFFX-BioB-M_st
6
5
18
0.3
238.3
A
AFFX-BioB-3_st
4
7
20
0.2
-6857.5
A
AFFX-BioC-5_st
5
8
17
0.25
-24.7
A
AFFX-BioC-3_st
5
7
19
0.25
-813.3
A
AFFX-BioDn-5_st
6
7
19
0.3
7402
A
AFFX-BioDn-3_st
9
3
19
0.45
3809.8
M
AFFX-CreX-5_st
7
3
18
0.35
4982
A
AFFX-CreX-3_st
9
4
18
0.45
5225.4
A
hum_alu_at
68
0
69
0.99
1849946.6
P
AFFX-DapX-5_at
7
3
19
0.35
834.9
A
Total number of rows:
7129
Table truncated, full table size
220 Kbytes
.
Supplementary data files not provided
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