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Sample GSM279945 Query DataSets for GSM279945
Status Public on Apr 07, 2008
Title Acupuncture-treated Normal Rat Lung
Sample type SAGE
Anchor NlaIII
Tag Count 29284
Tag Length 10
 
Source name Lung
Organism Rattus norvegicus
Characteristics SAGE profile of the normal male rat (Sprague Dawley) lung treated by acupuncture with linker sequences removed. Rats weighted 250 grams and were 50 days old.
Extracted molecule total RNA
Extraction protocol The SAGE library was established using the I-SAGE Kit (Cat. No. T5001-01; Invitrogen) according to SAGE protocol v1.0c (http://www.sagenet.org).
 
Description N/A
 
Submission date Apr 06, 2008
Last update date Nov 19, 2008
Contact name Yong Qing Yang
E-mail(s) dryqyang@mail2.online.sh.cn
Phone 86-21-54592134
Fax 86-21-54592134
Organization name Shanghai University of Traditional Chinese Medicine
Department Shanghai Research Institute of Acupuncture
Lab JOINT LABORATORY FOR ACUPUNCTURE AND HERBS RESEARCH
Street address 650 South Wanping Rd
City Shanghai
ZIP/Postal code 200030
Country China
 
Platform ID GPL23
Series (1)
GSE2475 SAGE Profiles of Rat Lung Tissues

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 189 6454.04
AAAAAAAAAC 3 102.45
AAAAAAAAAG 3 102.45
AAAAAAAAAT 2 68.30
AAAAAAAATG 1 34.15
AAAAAAATAA 1 34.15
AAAAAATAAA 6 204.89
AAAAACACCA 1 34.15
AAAAAGAAAT 1 34.15
AAAAAGAAGT 1 34.15
AAAAAGCTGG 1 34.15
AAAAAGGAAA 1 34.15
AAAAAGGACA 1 34.15
AAAAAGGAGA 1 34.15
AAAAAGGCAG 1 34.15
AAAAATAAAT 3 102.45
AAAAATATAT 1 34.15
AAAAATATTT 1 34.15
AAAAATCAAA 1 34.15
AAAAATCATC 5 170.74

Total number of rows: 12412

Table truncated, full table size 232 Kbytes.




Supplementary data files not provided

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